Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1610 AAGAGGACGAAGAAAAGAAGAAGAAGAAGAACAAGGAAGAAGAAGAATCCAAAAGCAATCCCATCTGAGTGTTTGCACATCAGAAGGGAGGGCTATCGAATTCAAAGTGGTTGTGTTGGATGCTATAAAAGGCCTACACTGAGCTCTACAGTGGATGTGCCAGCAAAAGGAGTTGCAACAAAAGGTAGCTCGGTGAGGAAACTTAGTTCATCAGAGGATTTCTGGACCACCAGCACGCATGATATGGACAACAGTGCCGTCCAGTCACAGGGGAGCATCTCTTCAGCCAGTCTGACAAACCAAGCTGTGGTTCCTCATGCTAGTTCTTCCAAAAACAGCACCAACCCCACTGAATTTGTAAATCATGGTCTAATTCTTTGGAACCAGACTCGGCAACGCTGGGTTGGAAATAAAAAGTCTGAAAACCGAACACAGCAATTACGAGAACCTAAATTGAGTTGGAATGCAACCTATGAAAGTTTACTTGGGAGCAACAAGCCTTTCCGTCAGCCTATCCCTCTTGCAGAAATGGTAGATTTTCTTGTGGACATCTGGGAGCAGGATGGCCTATACGACTGA 579 0.4525 KRTKKRRRRRTRKKKNPKAIPSECLHIRREGYRIQSGCVGCYKRPTLSSTVDVPAKGVATKGSSVRKLSSSEDFWTTSTHDMDNSAVQSQGSISSASLTNQAVVPHASSSKNSTNPTEFVNHGLILWNQTRQRWVGNKKSENRTQQLREPKLSWNATYESLLGSNKPFRQPIPLAEMVDFLVDIWEQDGLYD* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1610 192 PANTHER OS07G0479600 PROTEIN 28 192 - -
Pvu10g1610 192 Pfam Protein of unknown function (DUF4050) 78 150 IPR025124 -
Pvu10g1610 192 Pfam Protein of unknown function (DUF4050) 151 192 IPR025124 -
Pvu10g1610 192 PANTHER DUF4050 FAMILY PROTEIN 28 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1610 Pvu-Chr10 42423170 42425728 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1610 - - gmx:547651 296.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1610 10 42423170 42425728 Pvu5g1836 5 40038345 40041620 ECH
Pvu3g1713 3 37379792 37383129 Pvu10g1610 10 42423170 42425728 ECH
Pvu10g1610 10 42423170 42425728 Pvu10g1610 10 42423170 42425728 ECH
Pvu5g1836 5 40038345 40041620 Pvu10g1610 10 42423170 42425728 PCT