Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1713 ATGGTGATGATAACTGCTTGGATCACTGACCTCTTCGCTTGTATGGGTGGTTGCTTTGGATGTTGTATGAAACCCACACCAATTATTGCTGTGGATGAGCCGGCAAAGGGACTAAGAATTCAGGGGCAGACAGTGAGAAAACCACATATATCAGATGGTTTCTGGAGTTCAAGCACTTGTGATCTGGATAATGGCAACATTCAATCTCAGAGAAGTATCTCGTCTGTCAGTACGTTAAATCAAATTCTCTATCATAGTGGTGGAACTTCTACAGGCACCAATTCTGAATTTGTAAACCCAGGTCTTCTTCTCTGGAATGAAAGTAGGCTTCAGTGGGTTGGAAGTGAAAAATCTAGCAAGCCTAGCCAACAAAAACGAGTACCCAGACTGAATTGGAATGCAACTTATGAAAGTTTGCTTGGGACTAGACAACCTTTCCCCAAGTCCATACCTTTATCTGAAATGGTCGAATTCCTGGTGGATGTTTGGGAACGTGAAGGGATGTATGGTTGA 513 0.4288 MVMITAWITDLFACMGGCFGCCMKPTPIIAVDEPAKGLRIQGQTVRKPHISDGFWSSSTCDLDNGNIQSQRSISSVSTLNQILYHSGGTSTGTNSEFVNPGLLLWNESRLQWVGSEKSSKPSQQKRVPRLNWNATYESLLGTRQPFPKSIPLSEMVEFLVDVWEREGMYG* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1713 170 Pfam Protein of unknown function (DUF4050) 58 127 IPR025124 -
Pvu3g1713 170 Pfam Protein of unknown function (DUF4050) 126 169 IPR025124 -
Pvu3g1713 170 PANTHER DUF4050 FAMILY PROTEIN 3 169 - -
Pvu3g1713 170 PANTHER OS07G0479600 PROTEIN 3 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1713 Pvu-Chr3 37379792 37383129 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1713 - - pvu:PHAVU_003G165400g 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1713 3 37379792 37383129 Pvu10g1610 10 42423170 42425728 ECH
Pvu3g1713 3 37379792 37383129 Pvu5g1836 5 40038345 40041620 ECH
Pvu3g1713 3 37379792 37383129 Pvu1g0525 1 5832103 5835132 ECH
Pvu3g1713 3 37379792 37383129 Pvu3g1713 3 37379792 37383129 ECH