Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1192 ATGACTTGGAAAAGCAGGGGAGACCTGCTTCCCAAAAGTGTCATGTCTAAAAAATGGGTGATTTTTCTCTGTATTGGAAGCTTCTGTGCTGGGTTGGTTTTCACCAACAGGATATGGACTATTCCTGAACCTAAAGGACTTGGAAGGACAACAGCTATGGAAGCTGAAAAATTGAATGTAGTTTCAGAGGATTGTAATTCAAGAATTCTGCAAGAGAAGGAAGTGAAACGTGAAACTAAAGGCATCTATAGAGAGGCTTTCAAGACACAAAATGCCATACAAACCCTTGATAAGACAATTTCAAACTTGGAGTTGGAATTAGCAGCTGCAAAGGCAGCTCAGGAGTCTATACGAAATGGTGCTCCAGTACCAGAAGATATCAAGATGAGTGAATCATCTGGTAGGAGTAGGTACCTAATGGTAGTAGGAATCAACACTGCTTTCAGTAGCAGAAAAAGAAGAGACTCAATTCGTGAGACATGGATGCCACAAGGTGAGAAAAGAAAGAAGCTAGAGGAAGAGAAGGGCATTATCATCCGATTTGTAATTGGTCATAGTGCCACATCAGGGGGTATCCTAGACAGAGCTATTGAAGCAGAAGATAGAAGCATGGAGATTTTTCTGAGACTGGATCATGTTGAAGGATACCTTGAATTGTCAGCAAAGACAAAGACCTACTTTGCTACTGCTGTTAACTTATGGGATGCTGACTTCTATATCAAAGTTGATGACGATGTTCATGTAAATATAGCAACACTAGGACAAACTCTAGTGAGACACCGATCAAAACAACGGGTGTACATTGGATGCATGAAATCTGGGCCAGTTCTTTCTCAAAAAGGGGTAAGGTACCACGAGCCAGAATACTGGAAATTTGGAGAGGCTGGAAACAAGTACTTCCGTCATGCCACGGGGCAGTTGTATGCCATTTCAAAAGATCTGGCTACATACATTTCAAATAACAAGCACGTTCTCCACAAGTATGCCAATGAGGATGTGTCACTAGGCTCTTGGTTTATTGGACTTGATGTGGACCACATAGATGATCGAAGACTCTGCTGTGGTACACCACCAGATTGTGAATGGAAAGCACAGGCAGGCAATGTTTGTGTTGCTTCATTTGATTGGACTTGCAGTGGAATTTGTAGGTCTGCGGAAAGGATCAAAGAGGTCCACAAGAGATGTGGGGAAGGTGAGAAAGCTTTATGGAGTGCCTCTTTCTAG 1224 0.424 MTWKSRGDLLPKSVMSKKWVIFLCIGSFCAGLVFTNRIWTIPEPKGLGRTTAMEAEKLNVVSEDCNSRILQEKEVKRETKGIYREAFKTQNAIQTLDKTISNLELELAAAKAAQESIRNGAPVPEDIKMSESSGRSRYLMVVGINTAFSSRKRRDSIRETWMPQGEKRKKLEEEKGIIIRFVIGHSATSGGILDRAIEAEDRSMEIFLRLDHVEGYLELSAKTKTYFATAVNLWDADFYIKVDDDVHVNIATLGQTLVRHRSKQRVYIGCMKSGPVLSQKGVRYHEPEYWKFGEAGNKYFRHATGQLYAISKDLATYISNNKHVLHKYANEDVSLGSWFIGLDVDHIDDRRLCCGTPPDCEWKAQAGNVCVASFDWTCSGICRSAERIKEVHKRCGEGEKALWSASF* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1192 407 Pfam Galactosyltransferase 152 349 IPR002659 GO:0006486|GO:0016020|GO:0016758
Pvu5g1192 407 Coils Coil 93 113 - -
Pvu5g1192 407 Gene3D - 135 351 - -
Pvu5g1192 407 PANTHER HEXOSYLTRANSFERASE 8 399 - -
Pvu5g1192 407 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 8 399 IPR002659 GO:0006486|GO:0016020|GO:0016758
Pvu5g1192 407 Pfam Domain of unknown function (DUF4094) 16 112 IPR025298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1192 Pvu-Chr5 33339177 33343486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1192 1 407 Glycosyltransferase AT1G05170 75.430 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1192 K20855 - gmx:100793931 778.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1192 5 33339177 33343486 Pvu5g1192 5 33339177 33343486 ECH
Pvu5g1192 5 33339177 33343486 Pvu3g0819 3 12424979 12431126 ECH
Pvu5g1192 5 33339177 33343486 Pvu11g1064 11 11668754 11673709 PCT