Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0819 ATGTCTATGAAGAGCAAGGGGGGAGCTGCAGAACTGAGTGCAAGGAACGTCCTGCAGAGGAAATGGGCTCTTCTGCTCTGTGTGGCAAGCTTCTGTGCCGGAATGTTCTTCACAAATAGGATATGGTCGATGCCTGAATATATAGAAATTTCAGGGACTAGTGAGATTGAAAGAATAAAATTAAACTCTGATGGTTGTAATCTAAATCCAGTTGCAAGGCCAAGCTCAAATTACAGTAAAGTGGAAGTTTCAAATACACAGAATGTTGTCAAGAATGATGTCAAGAGACCAAGGAAGTCAGAGACAATTGAATCAAGTACTAGGAGAAAATATTTCATGGTTATAGGGATCAATACAGCTTTCAGTAGCAGGAAACGAAGAGACTCTGTTCGTACAACTTGGATGCCACGAGCTAATGAAAGACAGAAGTTGGAGGAAGAAAAGGGCATAATCATACGATTCGTTATAGGTCACAGTTCTACATCTGGTGGCATTCTTGACAAAGCTATTGAAGCAGAGGAGAAGCTTCATGCTGACTTTTTGAGGCTGAACCACGTTGAGGGATACCTAGAACTATCAGCTAAGACAAAGACCTACTTTTCGACTGCTGTTGCCTTGTGGGATGCGGAATTTTATGTTAAAGTTGATGATGATGTTCATGTCAATTTAGCAACACTTGGATTGACTTTGAGTATGCACCGAATGAAACCTCGGGTGTATGTTGGGTGCATGAAATCCGGTCCTGTCCTTGCTCAGAAGGGAGTTAAATACCATGAACCAGAATACTGGAAGTTTGGAGAGGTGGGAAACAAGTACTTCCGTCATGCTACAGGACAATTATATGCCATTTCCAAAGATTTGGCTACTTATATATCAATAAATCAGGATGTGCTACATAAATATGCCAACGAAGATGTTTCATTGGGATCTTGGTTTATTGGTTTAGACGTGGATCATGTTGATGATAGGAGAATGTGTTGTGGCACACCCCCTGATTGCGAGTGGAAGGCACAGGCTGGTAACGTATGTGTTGCTTCGTTTGATTGGAAATGCAGTGGAATCTGCAGGTCTGTAGAGAGGATGAAAGAAGTTCACCTGCGTTGTGGGGAGGATGAAAACGCTTTGTGGAGTGCAGCCTTATAA 1143 0.4217 MSMKSKGGAAELSARNVLQRKWALLLCVASFCAGMFFTNRIWSMPEYIEISGTSEIERIKLNSDGCNLNPVARPSSNYSKVEVSNTQNVVKNDVKRPRKSETIESSTRRKYFMVIGINTAFSSRKRRDSVRTTWMPRANERQKLEEEKGIIIRFVIGHSSTSGGILDKAIEAEEKLHADFLRLNHVEGYLELSAKTKTYFSTAVALWDAEFYVKVDDDVHVNLATLGLTLSMHRMKPRVYVGCMKSGPVLAQKGVKYHEPEYWKFGEVGNKYFRHATGQLYAISKDLATYISINQDVLHKYANEDVSLGSWFIGLDVDHVDDRRMCCGTPPDCEWKAQAGNVCVASFDWKCSGICRSVERMKEVHLRCGEDENALWSAAL* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0819 380 Pfam Domain of unknown function (DUF4094) 20 91 IPR025298 -
Pvu3g0819 380 Pfam Galactosyltransferase 125 322 IPR002659 GO:0006486|GO:0016020|GO:0016758
Pvu3g0819 380 Gene3D - 102 326 - -
Pvu3g0819 380 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 86 372 IPR002659 GO:0006486|GO:0016020|GO:0016758
Pvu3g0819 380 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 9 91 IPR002659 GO:0006486|GO:0016020|GO:0016758
Pvu3g0819 380 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE 1-RELATED 9 91 - -
Pvu3g0819 380 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE 1-RELATED 86 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0819 Pvu-Chr3 12424979 12431126 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0819 1 380 Glycosyltransferase AT1G05170 64.320 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0819 K20855 - gmx:100810168 689.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0819 3 12424979 12431126 Pvu3g0819 3 12424979 12431126 ECH
Pvu5g1192 5 33339177 33343486 Pvu3g0819 3 12424979 12431126 ECH
Pvu11g1064 11 11668754 11673709 Pvu3g0819 3 12424979 12431126 ECH