Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1064 ATGACTTGGAAGAGCAGAGGAGAATTCCCTTCTAGGAGCGTTATTTCGCAGAGATGGGCACTGTTTTTGTGCTTGGGAAGCTTCTGTGCTGGAATGCTCTTCACTACCAGGATATGGACTATTCCTGAAAACAACAAAGGACTAGCCCGACCAACGGCTGCAGAAGCTGATAAATTGAATGTAGTTTCAGAAGGTTGCAATTCCAGAATTATGCAAGAATTGGAAATGAAGCGCGATAAAGACATTTATGGTGAAGTTTACAAGAGCCATAATTCCATTCAAACGTTGGACAAGACTATTTCAAACTTAGAGATGGAATTGGCTGCTGCAAGGGCAACTCAGGAGTCTCTACGAAGTGGTGCTCCTGTTTCTGATGATATAAGGATGAGTGAATCATCTGGTAAGAGAAAGTACCTTATGGTCATTGGTATTAATACTGCATTTAGCAGCAGGAAAAGAAGGGACTCAGTTCGTGCCACTTGGATGCCACAAGGTGAGAAAAGAAAGAAGCTAGAGGAGAAGGGCATCATCATCCGCTTTGTAATTGGACACAGTGCTACATCAGGGGGTATTCTTGACAGAGCTATTGAAGCTGAGGACAGAAAGCATGGAGATTTCTTGAGGCTGAATCATGTGGAAGGATACCTTGAATTGTCAGCAAAAACAAAAACTTATTTTGCTACTGCTGTGAACTTGTGGGATGCTGATTTCTATGTCAAAGTTGATGATGATGTTCATGTAAATATAGCAACACTGGGGGAAACTTTAGTTAGACACCGATCAAAACCACGGATATACATTGGATGCATGAAATCTGGGCCAGTCCTATCTCAAAAAGGAGTAAGATACCACGAACCTGAGTACTGGAAATTTGGAGAGGCTGGAAACAAGTATTTCCGACATGCCACAGGGCAGTTGTATGCCATTTCAAACGATTTGGCTACATACATATCAATTAACCAGGATGTTCTTCACAAGTATGCCAACGAGGATGTGTCACTAGGATCTTGGTTTATTGGACTTGATGCGGAGCATATAGATGATAGAAGACTTTGCTGTGGCACTCCTCCAGATTGTGAGTGGAAGGCCCAAGCAGGCAACATTTGTGTTGCATCGTTTGATTGGAGCTGCAGTGGAATTTGCAGGTCTGCTGAGAGGATTAAAGAGGTACATAGGAGGTGTGGAGAGGGTGAGAATGCTTTGTGGAGTGCCTCTTTCTAG 1221 0.4308 MTWKSRGEFPSRSVISQRWALFLCLGSFCAGMLFTTRIWTIPENNKGLARPTAAEADKLNVVSEGCNSRIMQELEMKRDKDIYGEVYKSHNSIQTLDKTISNLEMELAAARATQESLRSGAPVSDDIRMSESSGKRKYLMVIGINTAFSSRKRRDSVRATWMPQGEKRKKLEEKGIIIRFVIGHSATSGGILDRAIEAEDRKHGDFLRLNHVEGYLELSAKTKTYFATAVNLWDADFYVKVDDDVHVNIATLGETLVRHRSKPRIYIGCMKSGPVLSQKGVRYHEPEYWKFGEAGNKYFRHATGQLYAISNDLATYISINQDVLHKYANEDVSLGSWFIGLDAEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWSCSGICRSAERIKEVHRRCGEGENALWSASF* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1064 406 Coils Coil 93 113 - -
Pvu11g1064 406 Pfam Galactosyltransferase 152 347 IPR002659 GO:0006486|GO:0016020|GO:0016758
Pvu11g1064 406 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 7 398 IPR002659 GO:0006486|GO:0016020|GO:0016758
Pvu11g1064 406 Pfam Domain of unknown function (DUF4094) 16 112 IPR025298 -
Pvu11g1064 406 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE 4-RELATED 7 398 - -
Pvu11g1064 406 SUPERFAMILY PspA lactotransferrin-binding region 51 112 - -
Pvu11g1064 406 Gene3D - 135 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1064 Pvu-Chr11 11668754 11673709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1064 1 406 Glycosyltransferase AT1G05170 77.941 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1064 K20855 - gmx:100794838 805.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1064 11 11668754 11673709 Pvu11g1064 11 11668754 11673709 ECH
Pvu11g1064 11 11668754 11673709 Pvu3g0819 3 12424979 12431126 ECH
Pvu5g1192 5 33339177 33343486 Pvu11g1064 11 11668754 11673709 PCT