Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2721 ATGGGAACCCCTTTAGCTGCAGAGGCTCTCTCTGCTTTTCTGCTGCTTTCCTTCTATGCAACACTGGTTTCTACCAAATACATCAACTACAATACCGGCGCTGCTATTGTGCCAGCAAAGTTGAATGTTCACCTGGTTCCACACTCCCATGATGATGTTGGTTGGCTCAAAACCGTTGACCAGTACTATGTTGGATCAAACAACAGTATCCAGGGAGCATGTGTTGAGAATGTGCTTGACTCGGTGGTTGTGTCTCTTCAGAAAGACCCAAATAGAAAGTTTGTGTTTGCTGAAATGGCCTTTTTCCATCGATGGTGGGTAGAACAAAGTCCAGAAACACAAGAAGAAGTCAGAAAGCTTGTGGATGCGGGGCAGCTAGAAATCATAAATGGTGGTTGGTGCATGCACGATGAAGCTGCAACGCACTACATAGACATGATTGATCAAACCACTTTGGGCCATCGATTTATTAAGGATGAGTTTAACAAGACTCCAACCGTTGGATGGCAGATTGATCCATTTGGACACTCTGCTGTGCAGGCTTACCTTCTTGGAGCTGAGCTTGGGTTTGATTCTGTACATTTTGCAAGAATTGATTATCAAGATAGAGCTAAGCGCAAAGCTGATAAGTCTCTTGAAGTTGTTTGGCGTGCCTCCAAAACATTTGGTTCTTCAGCTCAGATTTTTGCCAATGCTTTCCCTGTTCATTATAGTGCTCCAAATGGTTTCAACTTTGAAGTCAACAATGTTGATATTGATGTTGTTCCTGTGCAGGATGATCCTCTTATTTTTGACTACAACGTTGAAAAACGTGTCCAAGACTTTATTGATGCTGCTATTACCCAAGCAAATGTGACGAGGACAAACCATATAATGTGGACAATGGGTGATGATTTCCAGTACCAATATGCAGAGTCTTGGTTCAAGCAAATGGATAAATTAATTCACTATGTTAATAAGGATGGTAGAGTAAATGCTTTGTATTCCACTCCATCTATTTACACCAATGCAAAAAATGCTGCTCAGCAAACTTGGCCACTGAAAACTGATGATTACTTCCCGTATGCTGATAGGGCTAATGCTTATTGGACTGGCTATTTCACGAGTCGCCCAGCCTTAAAGCGATATGTTAGGATGATAAGTGGATACTATTTGGCAACGCGTCAACTTGAATCTTTTGTTGGAAAGCAATCAGATAAATACAATACTTTTGGTCTTGGAGATGCTCTAGGAATTGCACAACACCATGATGCTGTCAGTGGCACTGCCAAACAGCATACAACTAATGACTATGCCAAACGACTAGCTATTGGAGTCTCTGAGGCTGAATCAGTTGTTAGTTCTTCTTTGGCTTGTCTTACCAGTAAGAAATCAAGTGGTCAATGTTCAGCACCTGCATCGGCTTTTGCCCAGTGTCATTTGTTAAATATCAGTTACTGCCCTCCTACAGAAGATGGCATTCCAGACGCTAAGAGTTTGGTAGTTGTGGCGTATAACCCACTTGGATGGAAACGTACTGATATTGTCAAAATACCAGTTAATGATGCTAATCTTGTTGTCAAAGACACACTGGGCAATAATATTGAAGTACAATATGTGGGTGTGGATGATGTTACAACAAAATTAAGAAAGCTCTATGTGAAGGCTTATTTGGGGGTGTCACCAAAACAAGCCCCAAAGTACTGGCTTCTGTTTCAGGCGTCAGTACCTCCACTTGGATGGAGCACGTACTTCATTTCTAAAGCAACGGGAAAAGGGTCCAGAACAAAAAACCTATCTCACCTGGGCACTCAGAAAGGTGACACCATTGACATTGGGCCCGGAAATTTAAAGATGTCCTTTTCCTCAGCCTCTGGACAACTTAAAAGGATGTATAATTCTAGAACTGGAGTTGATATACCTATTCAACAAAGCTATCTCTATTATGGATCTAGTGAGGGTGATAATGATCCTCAGGCTTCTGGTGCATATATATTCCGGCCTAATGGATCCCCTCCAACTATCGTTTCAAGATCAGTTCCCATCAAGGTAATCCGCGGACCACTAGTTCATGAAGTTCATCAGAAATTTAGCTCTTGGATTTATCAGGTTACTAGGCTTTACAAAGACAAAGACCATGCTGAAGTCGAATTCACCATTGGGCCAATTCCTACCGATGATGGAGTAGGAAAAGAGGTGATCACACGAATGACAGCAAATATGGCCACAAACAAGGAGTTTTATACTGACTCCAATGGCAGAGATTTTCTCAAACGAGTTCGAGATCATAGGGATGATTGGCCCCTTCAAGTAACTCAACCAATAGCAGGAAACTATTGCCCACTTAATCTTGGAATTTATACCAAGGATAAGAAATCTGAGTTCTCAGTCTTAGTTGATCGTGCCACTGGTGGGGCTAGCATCAAAGATGGTGAGGTGGAATTGATGCTTCATAGGCGTATTCTTCGCGATGATAGTCGAGGAGTTGGGGAACCACTTGATGAACAAGTTTGCGTGAACAATAACGAAACATGTGAAGGACTAACAGTCAGAGGAAATTATTATATCAGCATAGACAAACTTGGAGCTGGTGCACGGTGGCGCCGTACAACTGGTCAAGAAATCTATTCGCCATTCTTATTGGCCTTTACACATGAGAATTTGGAAAGTTGGAAGTCCTCACATTTGACCAAAGGAACGATCATGGATCCAAATTACAGCTTGCCTCCCAATGTCGCTCTGATAACTCTTGAGGAGTTGGAAGGTGGAATTGTGCTTCTCCGTTTGGCACATTTGTATGAGCCAAGTGAAGATGCTGAGTATTCAACTCTAACCAAAGTTGAACTGAAGAAGTTGTTTGCCAAGAAAACGATAAAGGAGTTGAAGGAGGTAAGTTTATCAGCTAACCAAGAGAAGTCAGAAATGAAGAGAATGACATGGAAGGTTGAAGGAGACAAAGGACAAGAACCTCAAGGACTTAGGGGTGCCCCTGTCAGCAGTCCTAATTTGGTTGTTGAGCTTGGCCCCATGGAAATACGAACTTTCCTTTTGAAACTTTAA 3039 0.4218 MGTPLAAEALSAFLLLSFYATLVSTKYINYNTGAAIVPAKLNVHLVPHSHDDVGWLKTVDQYYVGSNNSIQGACVENVLDSVVVSLQKDPNRKFVFAEMAFFHRWWVEQSPETQEEVRKLVDAGQLEIINGGWCMHDEAATHYIDMIDQTTLGHRFIKDEFNKTPTVGWQIDPFGHSAVQAYLLGAELGFDSVHFARIDYQDRAKRKADKSLEVVWRASKTFGSSAQIFANAFPVHYSAPNGFNFEVNNVDIDVVPVQDDPLIFDYNVEKRVQDFIDAAITQANVTRTNHIMWTMGDDFQYQYAESWFKQMDKLIHYVNKDGRVNALYSTPSIYTNAKNAAQQTWPLKTDDYFPYADRANAYWTGYFTSRPALKRYVRMISGYYLATRQLESFVGKQSDKYNTFGLGDALGIAQHHDAVSGTAKQHTTNDYAKRLAIGVSEAESVVSSSLACLTSKKSSGQCSAPASAFAQCHLLNISYCPPTEDGIPDAKSLVVVAYNPLGWKRTDIVKIPVNDANLVVKDTLGNNIEVQYVGVDDVTTKLRKLYVKAYLGVSPKQAPKYWLLFQASVPPLGWSTYFISKATGKGSRTKNLSHLGTQKGDTIDIGPGNLKMSFSSASGQLKRMYNSRTGVDIPIQQSYLYYGSSEGDNDPQASGAYIFRPNGSPPTIVSRSVPIKVIRGPLVHEVHQKFSSWIYQVTRLYKDKDHAEVEFTIGPIPTDDGVGKEVITRMTANMATNKEFYTDSNGRDFLKRVRDHRDDWPLQVTQPIAGNYCPLNLGIYTKDKKSEFSVLVDRATGGASIKDGEVELMLHRRILRDDSRGVGEPLDEQVCVNNNETCEGLTVRGNYYISIDKLGAGARWRRTTGQEIYSPFLLAFTHENLESWKSSHLTKGTIMDPNYSLPPNVALITLEELEGGIVLLRLAHLYEPSEDAEYSTLTKVELKKLFAKKTIKELKEVSLSANQEKSEMKRMTWKVEGDKGQEPQGLRGAPVSSPNLVVELGPMEIRTFLLKL* 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2721 1012 PANTHER ALPHA-MANNOSIDASE 14 1011 - -
Pvu3g2721 1012 SUPERFAMILY Glycoside hydrolase/deacetylase 29 357 IPR011330 GO:0005975
Pvu3g2721 1012 SUPERFAMILY Families 57/38 glycoside transferase middle domain 361 460 IPR028995 -
Pvu3g2721 1012 SUPERFAMILY Galactose mutarotase-like 469 1011 IPR011013 GO:0003824|GO:0005975|GO:0030246
Pvu3g2721 1012 Gene3D Glycoside hydrolase 38, N terminal domain 41 324 IPR027291 -
Pvu3g2721 1012 Coils Coil 951 971 - -
Pvu3g2721 1012 Gene3D - 604 870 - -
Pvu3g2721 1012 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 904 1009 IPR041147 -
Pvu3g2721 1012 Pfam Glycosyl hydrolases family 38 N-terminal domain 42 356 IPR000602 GO:0004559|GO:0006013
Pvu3g2721 1012 Gene3D Glycoside hydrolase family 38, central domain 404 459 IPR037094 GO:0004559|GO:0006013
Pvu3g2721 1012 Pfam Alpha mannosidase middle domain 361 453 IPR015341 GO:0004559|GO:0006013
Pvu3g2721 1012 PANTHER ALPHA-MANNOSIDASE 14 1011 - -
Pvu3g2721 1012 SMART Alpha_mann_mid_2 361 435 IPR015341 GO:0004559|GO:0006013
Pvu3g2721 1012 Gene3D - 894 1012 - -
Pvu3g2721 1012 CDD GH38N_AMII_LAM_like 41 320 - -
Pvu3g2721 1012 Pfam Glycosyl hydrolases family 38 C-terminal domain 606 820 IPR011682 GO:0004559|GO:0006013
Pvu3g2721 1012 Gene3D Glycoside hydrolase family 38, central domain 325 403 IPR037094 GO:0004559|GO:0006013
Pvu3g2721 1012 Gene3D - 484 603 IPR013780 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2721 Pvu-Chr3 49155738 49164507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2721 5 959 Glycoside Hydrolase AT3G26720 60.230 0.0 1213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2721 K01191 - gmx:100775419 1845.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2721 3 49155738 49164507 Pvu3g2721 3 49155738 49164507 ECH
Pvu2g1107 2 21656943 21659263 Pvu3g2721 3 49155738 49164507 PCT
Pvu3g2721 3 49155738 49164507 Pvu2g1108 2 21663227 21668411 PCT