Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1107 ATTACTAGGGTTTACAAAGACAAAGAGCATGCTGAGATTGAATACACTATTGGTCCAATTCCTATGGGGTTTGGCGTTGGGAAAGACGTAATCACACAATTGACAACCAATATGCTGACAAACAAAGAGTTTTATACTGATTCTAATGGAAGAGATTTTTTGAAACGGGTACGAGATTATAGGGAAGATTGGCCCCTTAAAGTTACAGAGCCAGTAGCAGGCAACTACTATCCACTCAATCTTGGAATTTATATTAAGGATAATAAATCTGAATTATCAATCTTAGTTGATCGGGCCACTGGAGGAGGCAGTATAAAAGATGGTCAGGTGGAACTTATGCTTCATAGGAGAATGCAGTCTGATGATGGCAGAGGAGTAGGCGAAGGTCTTAATGAACAAGTGTGCCAAAATAATAAATGTCAAGGACTAAGAGTAAGAGGAAATTATCATGTGGCCATCCACAACCTTACAGCTGGTTCACGGTGGCGCCGGACAACTGGCCAGGAAATTTATTCACCATTATTATTGGCGTTTTCACAAGAGAAAATGGGAAATTGGAAGGCCTCTCATGTGACCAAAGGAACTCTCATTGACCCTAATTACAGCTTACCTCCTAATGTAGCTCTGATAACTCTCGAGGAGCTGGATAATAGAATGGTGCTTCTCCGTTTGGCACATCTATATGAGTCTGGTGAAGATGTTCAGCTTTCAACTTTAACCAAAGTTGAATTGAAGAAACTGTTTATCACAAAAACGATAAAGCAGTTGACTGAGGTTAGTTTATCAGCTAATCAAGAGAGGTCAAAAATGAAGAAGAAAACATGGAAGGTTGAAGGGGACAAGGGACAAGAATCAAAAGCAGTTAGGGGTGGCCCTGTCAGCCAAATCAGTCTTCTAGTTGAGCTTGGTCCAATGGAAATTCGCACTTTCCTACTGGAATTCTAA 945 0.4053 ITRVYKDKEHAEIEYTIGPIPMGFGVGKDVITQLTTNMLTNKEFYTDSNGRDFLKRVRDYREDWPLKVTEPVAGNYYPLNLGIYIKDNKSELSILVDRATGGGSIKDGQVELMLHRRMQSDDGRGVGEGLNEQVCQNNKCQGLRVRGNYHVAIHNLTAGSRWRRTTGQEIYSPLLLAFSQEKMGNWKASHVTKGTLIDPNYSLPPNVALITLEELDNRMVLLRLAHLYESGEDVQLSTLTKVELKKLFITKTIKQLTEVSLSANQERSKMKKKTWKVEGDKGQESKAVRGGPVSQISLLVELGPMEIRTFLLEF* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1107 314 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 206 311 IPR041147 -
Pvu2g1107 314 PANTHER ALPHA-MANNOSIDASE 1 314 - -
Pvu2g1107 314 PANTHER ALPHA-MANNOSIDASE 1 314 - -
Pvu2g1107 314 SUPERFAMILY Galactose mutarotase-like 2 314 IPR011013 GO:0003824|GO:0005975|GO:0030246
Pvu2g1107 314 Pfam Glycosyl hydrolases family 38 C-terminal domain 2 124 IPR011682 GO:0004559|GO:0006013
Pvu2g1107 314 Gene3D - 196 314 - -
Pvu2g1107 314 Gene3D - 1 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1107 Pvu-Chr2 21656943 21659263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1107 1 314 Glycoside Hydrolase AT5G66150 64.038 2.81e-137 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1107 K01191 - pvu:PHAVU_002G1073001 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1107 2 21656943 21659263 Pvu3g2721 3 49155738 49164507 PCT