Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2266 ATGAGCAACGGGGAGCTCCTCAACATCGAACCTCTGGAACTCAAGTTCGCCTTTGAACTCAAGAAGCAGATCTCATGTTCTCTTCAGTTGTCTAATAAGACCGATGCCTATGTCGCCTTCAAGGTCAAAACAACCAATCCGAAGAAGTATTGTGTTCGTCCGAACACCGGAATTGTCTTGCCACGATCTACATGTGATGTTATGGTTACCATGCAAGCACAAAGAGAGGCTCCGACTGATATGCAATGCAAGGATAAGTTTCTTCTTCAGAGCGTAAAAACTTTTGATGGTGCCAGTCCGAAGGACATCACTGCAGAAATGTTCAACAAGGAGGCGGGTCATGTGGTTGAGGAGAGCAAATTGAGAGTGCTGTATCTTCCTCCTCAACAACCACCGTCTCCAGTACCAGAAGGTTCTGAAGAAGGATCCTCACCTAGAGGTTCTGTTTCAGAGAATGGAAATGGCAACGGTTCTGACTTCACACAAGTAGCGAGAGGATTTACTGAGCGACCTGAGGCTCAAGAAAAATCTTCAGAGGCTAGAGCTCTTATCTCAAGACTGACTGAAGAAAAGAATAATGCAATTGAACAAAATAGCAAGCTCCGCCAGGAACTGGATCTACTGAAGCGGGAAAGCAATAAAAGTCGTGGTGGAGTCTCATATGTCATTGTCGTATTAATTGGCTTGCTTGGCATAATAATGGGGTATCTCTTGAAGAAGACCTAA 726 0.4477 MSNGELLNIEPLELKFAFELKKQISCSLQLSNKTDAYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDVMVTMQAQREAPTDMQCKDKFLLQSVKTFDGASPKDITAEMFNKEAGHVVEESKLRVLYLPPQQPPSPVPEGSEEGSSPRGSVSENGNGNGSDFTQVARGFTERPEAQEKSSEARALISRLTEEKNNAIEQNSKLRQELDLLKRESNKSRGGVSYVIVVLIGLLGIIMGYLLKKT* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2266 241 MobiDBLite consensus disorder prediction 143 162 - -
Pvu3g2266 241 SUPERFAMILY PapD-like 2 141 IPR008962 -
Pvu3g2266 241 PIRSF VAMP_assoc_prot 1 240 IPR016763 GO:0005789
Pvu3g2266 241 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Pvu3g2266 241 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 1 239 IPR016763 GO:0005789
Pvu3g2266 241 MobiDBLite consensus disorder prediction 126 162 - -
Pvu3g2266 241 Coils Coil 177 211 - -
Pvu3g2266 241 PANTHER VESICLE-ASSOCIATED PROTEIN 1-2-LIKE 1 239 - -
Pvu3g2266 241 Pfam MSP (Major sperm protein) domain 7 111 IPR000535 -
Pvu3g2266 241 Gene3D Immunoglobulins 2 130 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2266 Pvu-Chr3 43690457 43693719 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2266 - - gmx:100527687 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2266 3 43690457 43693719 Pvu3g2266 3 43690457 43693719 ECH
Pvu2g0645 2 6894572 6899095 Pvu3g2266 3 43690457 43693719 PCT
Pvu3g2266 3 43690457 43693719 Pvu2g0013 2 89650 93778 PCT