Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0013 ATGACCGCCTCTCAACTCATCTCCGTTAGTCCCGACGAACTCCGCTTCCATTTTGAGTTGGAGAAGCAAACGTTTTGCGATCTTAAGGTCCTCAATAACACACAGAATCATGTTGCTTTCAAGGTCAAAACCACTTCTCCCAAGAAATACTTCGTACGGCCAAACACCGGTGTCGTACACCCCTGGGACTCCTGTATCATCAGAGTCACCCTCCAAGCCCAACGGGAATACCCTCCAGACATGCAATGTAAAGACAAGTTTCTCTTACAGAGTACAATAGTGAATCCAAATACTGATGTTGACGACCTCCCACCAGATACTTTTAATAAGGAAAGTGGTAATTCAATAGAGGAGTTGAAATTAAGAGTTGCATATATCTCTGCTGCCTCACCCGAAGGATCTGAAGATGATGCATCAAGGAACTCACATAAACTTGATACCTCTTCTAGTCAGGCTTTACAGGATCTGAAGGAAGAAAGAGATGCCGCTGCCAGACAAACAAGACAACTGCAACAGGAACTGGACATGATGAAAAGACGAAGAAACCGAAAAAGTGATCCTGGCTTTTCCTTCATCTTTGCCATTTTTGTGGGTGTCCTTGGAGTTTTACTTGGCTTTCTTTTGAAACTTTTATTCTCTTCTCCATCTAGAGAATGA 657 0.4323 MTASQLISVSPDELRFHFELEKQTFCDLKVLNNTQNHVAFKVKTTSPKKYFVRPNTGVVHPWDSCIIRVTLQAQREYPPDMQCKDKFLLQSTIVNPNTDVDDLPPDTFNKESGNSIEELKLRVAYISAASPEGSEDDASRNSHKLDTSSSQALQDLKEERDAAARQTRQLQQELDMMKRRRNRKSDPGFSFIFAIFVGVLGVLLGFLLKLLFSSPSRE* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0013 218 Coils Coil 153 180 - -
Pvu2g0013 218 Pfam MSP (Major sperm protein) domain 7 104 IPR000535 -
Pvu2g0013 218 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 3 215 IPR016763 GO:0005789
Pvu2g0013 218 SUPERFAMILY PapD-like 3 131 IPR008962 -
Pvu2g0013 218 Gene3D Immunoglobulins 2 128 IPR013783 -
Pvu2g0013 218 PANTHER VESICLE-ASSOCIATED PROTEIN 2-1 3 215 - -
Pvu2g0013 218 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Pvu2g0013 218 MobiDBLite consensus disorder prediction 153 168 - -
Pvu2g0013 218 MobiDBLite consensus disorder prediction 131 168 - -
Pvu2g0013 218 PIRSF VAMP_assoc_prot 1 155 IPR016763 GO:0005789
Pvu2g0013 218 PIRSF VAMP_assoc_prot 127 210 IPR016763 GO:0005789
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0013 Pvu-Chr2 89650 93778 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0013 - - gmx:100794270 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2266 3 43690457 43693719 Pvu2g0013 2 89650 93778 PCT