Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0645 ATGAGCACCGGCGACCTTCTCAGCATCGAACCTCTCGAACTGAAGTTCTTCTTTGAGCTCAAGAAGCAGATCTCGTGTTCTCTTATATTGTCAAATAAGACCGACAGCTATGTAGCTTTCAAGGTCAAAACGACCAATCCGAAGAAGTACTGTGTTCGTCCAAACACTGGAATTGTCTTGCCACGATCTACATGCGATGTTATCGTTACCATGCAAGCGCAAAAGGAAGCTCCTTCTGATATGCAATGCAAGGATAAATTTCTTCTTCAAAGCGTAAAAGTAGAGGATGGAATCGCCGCAAAGGATATCACTGCAGAAATGTTCAACAAGGAAGCGGGGCATGTGGTTGAGGAGTGCAAATTGAGAGTGTTGTATGTCTCTCCGCCTCAACCTCCGTCTCCAGTCCCAGAAGGTTCTGAGGAAGGATCATCACCTAGAGGTTCTGTTTCCGACAATGGAAATATCAGCGGTGCTGACTCCGCGGCAGTAACAAGAGCATTTGCTGAACGACATGACGGTCCAGAAAAGTCTGCAGAGGCAAAAGCTCTTATCTCAAGGCTGAACGAAGAAAAGAATAATGCAATTCAACAAATTAACAAGCTTCGTCAGGAACTGGACACACTGAGACGGGAAAGCAACAAAAGTCGTGGGGGTGTCTCGATGGTCATTGTCATATTAATTGGTTTACTTGGCATAATTATGGGGTATCTCATGAAGAAGACCTAA 726 0.449 MSTGDLLSIEPLELKFFFELKKQISCSLILSNKTDSYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDVIVTMQAQKEAPSDMQCKDKFLLQSVKVEDGIAAKDITAEMFNKEAGHVVEECKLRVLYVSPPQPPSPVPEGSEEGSSPRGSVSDNGNISGADSAAVTRAFAERHDGPEKSAEAKALISRLNEEKNNAIQQINKLRQELDTLRRESNKSRGGVSMVIVILIGLLGIIMGYLMKKT* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0645 241 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Pvu2g0645 241 Gene3D Immunoglobulins 2 130 IPR013783 -
Pvu2g0645 241 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 1 239 IPR016763 GO:0005789
Pvu2g0645 241 PANTHER VESICLE-ASSOCIATED PROTEIN 1-2-LIKE 1 239 - -
Pvu2g0645 241 PIRSF VAMP_assoc_prot 1 240 IPR016763 GO:0005789
Pvu2g0645 241 MobiDBLite consensus disorder prediction 127 155 - -
Pvu2g0645 241 Coils Coil 177 211 - -
Pvu2g0645 241 SUPERFAMILY PapD-like 2 141 IPR008962 -
Pvu2g0645 241 Pfam MSP (Major sperm protein) domain 7 111 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0645 Pvu-Chr2 6894572 6899095 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0645 - - gmx:100791280 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0645 2 6894572 6899095 Pvu2g0645 2 6894572 6899095 ECH
Pvu2g0645 2 6894572 6899095 Pvu3g2266 3 43690457 43693719 PCT