Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1376 ATGAAGGAACCCACCCCACAAAGGAGAAGAACTCCTTCCTTCTCCTCCTCTCTTCTCGACGCCATCTACCATTCCATCGACCACTCAAAATCCAACCTTCACCAGGATCAACACCCTTCTCTCTTCGACCCAACTGTGCAATCTTTCGACTTTCAAAAAGGTGGCAAGAAAGAGAGAATGAATCTTCGCCGAGCCGTCATGCTAGAGGATTGGATGGAGAACCATACTTCTCATTCCCGTTCCCGTTCCCTCAGCTCTCAGTTGCTCAACTCCAGTTCAAGCTCCTCGGAATGCAGCTCCGGGGGGATATTTTCCTCTTCAGAAACCGACACCACGACCTTGAAGAAACAAAGACCCAGACCCACATCGGAGAAGAAGAAACAAGAGCACAGGGTCTCCGAGAAGCAGAATAAAGAGGGTGGTTTCGCAAGGACCAAGTTGCGGGCTTTGAAAATTTACGGCGAATTGAACCAGAGAGTGAAGCAACCCATTTCACCAGGGAGCAGAATCGCTACCTTCCTTAGCTCCATCTTCAACTCCCAGAACGTCAAGAAAGCCAAAATGTGTTACGTTGGGGCTGTTGAAGATGTTAGCTTCGAACACAAATCAAAGTCCCCGTGTTTCTCTTCGACTCCTTCTTCGTTCTCCAGAAGGTCTTGCATGAGCAAAACATCCTCTTCGGCTAAAAAATCCAACGCCAATGGGGTCAAAAGATCCGTTAGGTTTTATCCCGTTAGCGTAATCCTAGGTGAGGATTCTGAACCACAACCCAGTTATCACAAATGTAGCAATATTTATGAGAGTGGGCCTAACTTCACTGTGAGGAAGATCACTAGAAGTTCTTCGATAACGGAGCAGAAGAACACTGTTCGGGGAAATGAAAATGGAGCTGAAGAAGCAGCAGCGCGTGGTTTTGTAAAAGGTTACAGAAATTCTGGTAAGGGTGAATTTGATATTAGAGGCTTTTATGGTAATGAGGAGGAGGATGATGATGATGATGAAGAGGAGGAGGATGAAGAAGATGATGTGAGTTGTTCAAGTTCAGATTTGTTTGAGCTGGATCATCTTGTTGGAGCTGCAAGGTACCAAGAAGAACTTCCTGTCTATGAAACTACCAATTTGGAAACAAATAAAGCCATTGCTAGTGGTCTATGTTTGTAG 1161 0.4565 MKEPTPQRRRTPSFSSSLLDAIYHSIDHSKSNLHQDQHPSLFDPTVQSFDFQKGGKKERMNLRRAVMLEDWMENHTSHSRSRSLSSQLLNSSSSSSECSSGGIFSSSETDTTTLKKQRPRPTSEKKKQEHRVSEKQNKEGGFARTKLRALKIYGELNQRVKQPISPGSRIATFLSSIFNSQNVKKAKMCYVGAVEDVSFEHKSKSPCFSSTPSSFSRRSCMSKTSSSAKKSNANGVKRSVRFYPVSVILGEDSEPQPSYHKCSNIYESGPNFTVRKITRSSSITEQKNTVRGNENGAEEAAARGFVKGYRNSGKGEFDIRGFYGNEEEDDDDDEEEEDEEDDVSCSSSDLFELDHLVGAARYQEELPVYETTNLETNKAIASGLCL* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1376 386 MobiDBLite consensus disorder prediction 317 348 - -
Pvu3g1376 386 MobiDBLite consensus disorder prediction 31 57 - -
Pvu3g1376 386 PANTHER PROTEIN BIG GRAIN 1-LIKE A 3 386 - -
Pvu3g1376 386 MobiDBLite consensus disorder prediction 113 141 - -
Pvu3g1376 386 MobiDBLite consensus disorder prediction 78 112 - -
Pvu3g1376 386 MobiDBLite consensus disorder prediction 323 347 - -
Pvu3g1376 386 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 3 386 IPR039621 GO:0009734
Pvu3g1376 386 MobiDBLite consensus disorder prediction 74 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1376 Pvu-Chr3 32355672 32356999 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1376 - - gmx:100803228 480.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1376 3 32355672 32356999 Pvu10g1378 10 40304041 40305748 ECH
Pvu3g1376 3 32355672 32356999 Pvu9g0833 9 13003491 13005359 ECH
Pvu3g1376 3 32355672 32356999 Pvu1g0401 1 3993848 3994972 ECH
Pvu3g1376 3 32355672 32356999 Pvu3g1376 3 32355672 32356999 ECH