Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1378 ATGGACAAGTGGGACAATAAACCATCAAGAAAACAGCACCACAGAGAAAACCCTTCTTTCTCTTCCACTCTACTTGACGTTATCTACCGTTCGATCGACGAAGATCAAACGGAGGAGAAGGAAGACGAGCAGCTTATCTTCTACAGGGAAACCATGAGGAAGCAGAAGCAGAGCAATTGTTTCAGAGAGGACAAAACTGAAGCTGAGAAGCACAACTCTCGCAGGGCCAGGAAGGTGGAGAGTTGGATGGAGAAGAGAACCTGCGAGAAAGTTCTAATGGGGAGAAACTCTTTGACGGAATTTGAAAGAAGAACGCGAAGCAATTCGATTTCAAACACTCTCTCCATGTATTCAAGCTCAACCTCTTCCTCTGAGTCAAGCTCTGTTGGGGGGTTCTCTTCTTCAGAGTCAGAGTCCTTCTATGGAGTGCAAAGGCCAAAGCCAATTAAAGTCAGTGTTTCTGATAAAACCAAAACCAAAACCAACTTTGATGCCGCACTTCACGATCACAACTTCAGGAGCCACTCTTCTCAAGCCCAAAAGCCAAAGCATGAGAATGGTTTTGGCAAAACCAAGTCCAAAGCCTTGAAAATCCTTTATGGTGAGTTGAAGAAAGCAAAGCAACCAATTTCACCAGGTGCAAGACTCGCTAGCTTTCTCAACTCTCTCTTCACTTCAAGTGGAAATGCCAAAAAAGCTAAGGTTTCAACAACAACCACAACAACGACATCTACTTGTCGTCCTGTTCTGTTTCCGGTTGCAACAAATCGTTCTGACGATACTAAATCAGCGGCACAACAGCCCGGTTCCACATGTTCATCAGCATCTTCTTTTTCAAGGTCTTGTTTGAGCAAAACCCCTTCTTCAAGATCAGGCGCCAAAAGGTCTGTGAGGTTTTGCCCTGTGAGTGTGATAGTAGATGAAGATTGTAGGCCTTGTGGGCACAAGAATGTTTATGAGGGTGAAGAAGGTTTGGTGGGTTCCAATGGAAAGAACAGGAGTGAGGAACTGAGGCTGCATGTCATGCAGGAGAGTCGCAGGGTGGAGGAGTTAGCAAGAGACTTACTGAAGAATTATCAGAAAAAGAGTGAAGTGGAGTTTGATGCTGTTATGCATTACGAAGATGAAGAAGAAGAAGAAGATGATGATGATGTAGCAAGTTGTTCAAGCTCTGATCTCTTTGAGTTGGATAATCTATCAGCAATTGGTATTGAGAGGTACAGGGAAGAGTTACCTGTGTATGAAACTACCCATTTCAATACCAATAGAGCCATTGCCAATGGCTTCATTCTGTAA 1296 0.4398 MDKWDNKPSRKQHHRENPSFSSTLLDVIYRSIDEDQTEEKEDEQLIFYRETMRKQKQSNCFREDKTEAEKHNSRRARKVESWMEKRTCEKVLMGRNSLTEFERRTRSNSISNTLSMYSSSTSSSESSSVGGFSSSESESFYGVQRPKPIKVSVSDKTKTKTNFDAALHDHNFRSHSSQAQKPKHENGFGKTKSKALKILYGELKKAKQPISPGARLASFLNSLFTSSGNAKKAKVSTTTTTTTSTCRPVLFPVATNRSDDTKSAAQQPGSTCSSASSFSRSCLSKTPSSRSGAKRSVRFCPVSVIVDEDCRPCGHKNVYEGEEGLVGSNGKNRSEELRLHVMQESRRVEELARDLLKNYQKKSEVEFDAVMHYEDEEEEEDDDDVASCSSSDLFELDNLSAIGIERYREELPVYETTHFNTNRAIANGFIL* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1378 431 MobiDBLite consensus disorder prediction 57 81 - -
Pvu10g1378 431 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 10 431 IPR039621 GO:0009734
Pvu10g1378 431 PANTHER PROTEIN BIG GRAIN 1-LIKE A 10 431 - -
Pvu10g1378 431 MobiDBLite consensus disorder prediction 255 293 - -
Pvu10g1378 431 MobiDBLite consensus disorder prediction 1 22 - -
Pvu10g1378 431 MobiDBLite consensus disorder prediction 1 17 - -
Pvu10g1378 431 MobiDBLite consensus disorder prediction 113 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1378 Pvu-Chr10 40304041 40305748 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1378 - - gmx:100798956 676.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1376 3 32355672 32356999 Pvu10g1378 10 40304041 40305748 ECH
Pvu9g0833 9 13003491 13005359 Pvu10g1378 10 40304041 40305748 ECH
Pvu10g1378 10 40304041 40305748 Pvu10g1378 10 40304041 40305748 ECH
Pvu10g1378 10 40304041 40305748 Pvu9g0833 9 13003491 13005359 ECH
Pvu10g1378 10 40304041 40305748 Pvu1g0401 1 3993848 3994972 ECH