Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0401 ATGTACAACTTAGAAAAGCCCCGAAGAGACGATGACAACAAGCTACGAACTCCATCTTTCTCTACCACTCTCCTTGACCAAATCTACAGTTCCATCGACGAGGGAGAGAGAAAAAACGGCGAAACCAAATTCTACAGACACACAACGATGAGCACCAGCAAGAAACAGAGTAGTAGGGGCAATTCGAAATCCGTTGACGCGGATAAAAAATTTGTCGGCGCGAAAGCCGACAAAAAAAAATTGCACCGCGACGAGGATGCTTTGTTCTTCAGCTCCACCTCGGTTTCCTCGGATTCCAGCTTTGGATTCTCATCGTCCGACAACGAATCCATCTCGCGCGAACCGTGTCTGGTGCCGTGCGCCAGGCTCGTGGGCGCGAGCGCGTCGTTCCGGTCGGAGAGATACGGAATTCGCATGTTCGAGGGATTGTGTCGGAACTCCCACACCTCTGAGGAGCGACACGTGGCGGCTCGCAATGAGGAGATGCTAATAAAATCCAAGTCCCGGGCGTTGAAGATTTACAACAACCTTAAAAAGGTGAAACAACCGATTTCTCCTGGTGGTCGAGTCACCAGTTTCCTCAACTCGCTCTTCGCGAACACTAAGAAAACAAGTTCCCGCTCGTGCGGCGAAGTGCGACACGCTTCTTCATCTTCTTCTTCTTCTTCTTCATCCAGCTCCTCCACGTGCTCCTCTGCTTCCTCATTGTCCCGCTCTTGTTTGAGCAAAACCATGTCTTCAGAAAGAGAGAGGATGCGCAATGGGGTGAAGCAAACCGTGCGTTTTTACCCCGTGAGTGTAATCGTGGGTGAAGATAGTCGACCCTGTGGGCACAAACGTTTGTGTGAAGGGGAAGAAGCTTCTAGAGGGTTCTTGAGAGAGTACCGACAGAATCCAAAGAAGGGCAATGATTTGGTTTTAAAGGACTTGTCTTTGAGGAGTAAAGTTGATTATGATGAGGAGGAGGATGATGATGATGATGCATCGAGTTATGCAAGTTCGGATCTCTTCGAGCTTGATCATTTGGCTGTGTTTGGAAGTGAAAGGTACTGTGAGGAGCTTCCAGTGTATGAAACCACTCATGTTGGTACTAACCGCGCCATTGCTAATGGCCTCATAGTGTAG 1125 0.4916 MYNLEKPRRDDDNKLRTPSFSTTLLDQIYSSIDEGERKNGETKFYRHTTMSTSKKQSSRGNSKSVDADKKFVGAKADKKKLHRDEDALFFSSTSVSSDSSFGFSSSDNESISREPCLVPCARLVGASASFRSERYGIRMFEGLCRNSHTSEERHVAARNEEMLIKSKSRALKIYNNLKKVKQPISPGGRVTSFLNSLFANTKKTSSRSCGEVRHASSSSSSSSSSSSSTCSSASSLSRSCLSKTMSSERERMRNGVKQTVRFYPVSVIVGEDSRPCGHKRLCEGEEASRGFLREYRQNPKKGNDLVLKDLSLRSKVDYDEEEDDDDDASSYASSDLFELDHLAVFGSERYCEELPVYETTHVGTNRAIANGLIV* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0401 374 MobiDBLite consensus disorder prediction 208 234 - -
Pvu1g0401 374 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 79 374 IPR039621 GO:0009734
Pvu1g0401 374 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 1 68 IPR039621 GO:0009734
Pvu1g0401 374 MobiDBLite consensus disorder prediction 45 60 - -
Pvu1g0401 374 MobiDBLite consensus disorder prediction 31 66 - -
Pvu1g0401 374 PANTHER PROTEIN BIG GRAIN 1-LIKE B 79 374 - -
Pvu1g0401 374 PANTHER PROTEIN BIG GRAIN 1-LIKE B 1 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0401 Pvu-Chr1 3993848 3994972 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0401 - - var:108337614 582.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0401 1 3993848 3994972 Pvu1g0401 1 3993848 3994972 ECH
Pvu9g0833 9 13003491 13005359 Pvu1g0401 1 3993848 3994972 ECH
Pvu3g1376 3 32355672 32356999 Pvu1g0401 1 3993848 3994972 ECH
Pvu10g1378 10 40304041 40305748 Pvu1g0401 1 3993848 3994972 ECH