Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3185 ATGGAGATTGAGGGAAGCACGGAGATGGTGGCGAAGAAGGTATGGAACATCGTACGTGTGATGTTCTTCATGTTGAGGAAGGGCATAGCCAAGAGCAAAATAATGGCGGATTTCCATCTCATGCTCAAACGTGGAAAGAAGGCCTTGCTCAACAACCTCATGCTCAACTACTACATGGCCTCCTTCACCTCCTCCCGCTCCCACCACAACCACCACGCCACCTTCATCTCCCCACGCGACTACGAGTTCAGCTGCAGCAACAGCCCCGTCATCCCCTTCCACGCCGTCAAACGCACCCACAAAAATCACCGCTTCTCCAAACCCTCCCAACACCACGACGTTTCCACGCTCTCCGCCGTTCAGAAGGTTCTCGAAATCCTCAACAACGACGCCAGCAACTCCCCCTTCCCCGCCTTCGGAAAAAGCCCTATCGGCAAGCAACTCAGAGTCACCGACTCACCCTTCCCTCTCAAAGACGACGGCGATAGCCAAGTCGACGTGGCAGCGGAAGAATTCATCAAGAAGTTCTACAATGACCTCAACTTGCAGAAAAAAATGGCACATCTTGAGTCCCCATATCATACTTCATGGAGAACATGA 600 0.525 MEIEGSTEMVAKKVWNIVRVMFFMLRKGIAKSKIMADFHLMLKRGKKALLNNLMLNYYMASFTSSRSHHNHHATFISPRDYEFSCSNSPVIPFHAVKRTHKNHRFSKPSQHHDVSTLSAVQKVLEILNNDASNSPFPAFGKSPIGKQLRVTDSPFPLKDDGDSQVDVAAEEFIKKFYNDLNLQKKMAHLESPYHTSWRT* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3185 199 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 3 195 - -
Pvu2g3185 199 Pfam Cotton fibre expressed protein 163 186 IPR008480 -
Pvu2g3185 199 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN 3 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3185 Pvu-Chr2 47130193 47131520 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3185 - - gmx:100305871 247.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3185 2 47130193 47131520 Pvu10g1517 10 41728560 41729341 ECH
Pvu2g3185 2 47130193 47131520 Pvu5g1720 5 39169772 39170692 ECH
Pvu2g3185 2 47130193 47131520 Pvu2g3185 2 47130193 47131520 ECH
Pvu2g3185 2 47130193 47131520 Pvu4g1799 4 45191505 45192407 PCT