Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1119 ATGGGGGACATAGTCAAGCAAATATTGGCCAAACCCATCCAGCTGGCGGACCAAGTCACAAAAGCCGCCGACGAGGCCACTTCCTTCAAACAGGAATGTGCCGAGCTCAAGTCCAAGACGGACAAGCTGGCGGCGCTGCTGCGTCAGGCCGCGCGTTCCAGTTCCGAACTCTACGAGCGTCCCACGCGCCGCATCATCCACGAAACCGAACAGGTCCTCGAAAAGGCTCTAGCCCTGGTCCTCAAGTGTCGCGGCAACGCTCTCATGAAGCGCGTGTTCACCCTCAACCCCAGCGCCTCCTTCCGCAAGGTCTCCTCCCACCTTGAAAACTCCATCGGCGACATCTCCTGGCTCCTCCGTGTCTCGGCCGGGGAAGCTGGCGGCGAATACCTCGGCGGGCTCCCTCCTATAGCCGCGAACGAGCCGATCCTCTGCCTCATCTGGGAGCAGATCGCCGTCCTCCACACGGGGTCCGCGGAGGAGCGGTCGGACGCGGCGGCGTCGCTGGTCTCCTTGGCGAGCGGCAGCCAGCGGTACGGGAAGCTGATAATCGAAGAGGGCGGAGTGGGGCCGCTGCTGAAGCTTCTGAAGGAAGGGAAAAGCGAAGGGCAAGAGAATGCGGCACGTGCCGTGGGTCTGCTTGGGCGTGACCCTGAGAGCGTGGAGCACATGATCCACGTGGGGGTGTGCTCGGTGCTGGCGAAGATCCTGAAAGAAGGTCCTATGAAAGTGCAAGGTGTGGTGGCATGGGCGGTGTCGGAACTCGCTGCGAATTACCCAAAGTCGCAGGACCTTTTCGCTCAGCACAAGATCGTAACCTTGCTCGTTGGCCACCTCGCTTTCGAAACCGTTGAGGAACACAGTAAGTACGCTATTGTCAGCAAGAAACCCAATTCCATCCACGCCGTCCTCGTCGCCACGACCAACTCCACCAACGCTAATATCCCAAAGGAAAATCACTACCACGACGCTGAACTTCCCACACGCATCCCGCACCCCTTTGTTGAACGACCTCGAAATCTCCACAGAGTAATCACCAGCACAATCGCAATGCACGCTGCCACCAAGCAAGGAAACGAAAGCAATCCGAATCAGAACAAGAGTAATGGAGTTGGTACTGATGTTCAGCTGGGCAACAACAATCAGAGTCACCAGCGAAACTATTCACATTCGGGGATTAACATGAAAGGAAGGGATCTGGAGGATCCTGGAACTAAGGCTTACATGAAGGAAATGGCAGCGAGGGCTCTCTGGCAATTGGCCAAAGGTAACTCGCCAATTTGCCGTAGCATCACCGAATCACGAGCCTTGTTGTGTTTTGCTGTTCTCCTTGAGAAAGGAACAGAGGCTGTGAAGTACAATTCGGCGATGGCGGTGATGGAGATTACAGCGGTGTCAGAGAAAGATCCGGAATTGAGGAAATCGGCGTTCAAGCCGAACTCTCCCGCTTGCAAAGCCGTGGTTGATCAAGTGGTTAAGATAATGGAGAAGGCGGATTCGGATTCAATCCTTCTGATACCGTGCATCAAGACGATTGGGAATTTGGCGAGAACGTTCAAGGCCACAGAGACAAGGATGGTTGGGCCGTTGGTGAGGCTTCTGGACGAAAGGGAAGCCGAGGTGACAAGAGAGGCGTCGATTGCACTGGCGAAATTCGCTTGCACCGAGAATTACCTGCATGTGGATCACGCCAAGGCAATTATTAGCGCCGGCGGGGCTAAACACTTGATTCAGCTGGTCTATTTTGGAGAAGAGATGGTTCAGATTCCGGCGCTGCTTCTGCTCTCCTACATTGCAATGCACGTCCCCGACAGCGACGAACTTGCTCAGGCTGAAGTCCTCGGAGTCATTGAATGGGCCTCCAAACAATCCTCCGTTGCCCATAACCAAATACTCGAGGCCCTTTTGCTCGATTCCAAGAGCAGATTGGAGCTTTACCAGTCCAGAGGTCCCAGAGGATCCCATCAACTACATTTACATCACTAG 1986 0.5519 MGDIVKQILAKPIQLADQVTKAADEATSFKQECAELKSKTDKLAALLRQAARSSSELYERPTRRIIHETEQVLEKALALVLKCRGNALMKRVFTLNPSASFRKVSSHLENSIGDISWLLRVSAGEAGGEYLGGLPPIAANEPILCLIWEQIAVLHTGSAEERSDAAASLVSLASGSQRYGKLIIEEGGVGPLLKLLKEGKSEGQENAARAVGLLGRDPESVEHMIHVGVCSVLAKILKEGPMKVQGVVAWAVSELAANYPKSQDLFAQHKIVTLLVGHLAFETVEEHSKYAIVSKKPNSIHAVLVATTNSTNANIPKENHYHDAELPTRIPHPFVERPRNLHRVITSTIAMHAATKQGNESNPNQNKSNGVGTDVQLGNNNQSHQRNYSHSGINMKGRDLEDPGTKAYMKEMAARALWQLAKGNSPICRSITESRALLCFAVLLEKGTEAVKYNSAMAVMEITAVSEKDPELRKSAFKPNSPACKAVVDQVVKIMEKADSDSILLIPCIKTIGNLARTFKATETRMVGPLVRLLDEREAEVTREASIALAKFACTENYLHVDHAKAIISAGGAKHLIQLVYFGEEMVQIPALLLLSYIAMHVPDSDELAQAEVLGVIEWASKQSSVAHNQILEALLLDSKSRLELYQSRGPRGSHQLHLHH* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1119 661 Gene3D - 378 642 IPR011989 -
Pvu2g1119 661 Coils Coil 19 39 - -
Pvu2g1119 661 MobiDBLite consensus disorder prediction 356 375 - -
Pvu2g1119 661 Pfam Armadillo/beta-catenin-like repeat 182 212 IPR000225 GO:0005515
Pvu2g1119 661 Gene3D - 147 305 IPR011989 -
Pvu2g1119 661 SMART arm_5 480 517 IPR000225 GO:0005515
Pvu2g1119 661 SMART arm_5 424 464 IPR000225 GO:0005515
Pvu2g1119 661 SMART arm_5 560 600 IPR000225 GO:0005515
Pvu2g1119 661 SMART arm_5 176 216 IPR000225 GO:0005515
Pvu2g1119 661 SMART arm_5 217 257 IPR000225 GO:0005515
Pvu2g1119 661 PANTHER ARMADILLO REPEAT ONLY 4 1 655 - -
Pvu2g1119 661 PANTHER - 1 655 - -
Pvu2g1119 661 SUPERFAMILY ARM repeat 152 620 IPR016024 -
Pvu2g1119 661 Gene3D - 3 121 IPR036537 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1119 Pvu-Chr2 21912485 21914908 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1119 - - gmx:100816188 1046.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1119 2 21912485 21914908 Pvu2g1119 2 21912485 21914908 ECH
Pvu2g1119 2 21912485 21914908 Pvu3g2708 3 49056207 49056820 PCT
Pvu3g2688 3 48907424 48909427 Pvu2g1119 2 21912485 21914908 PCT
Pvu3g2707 3 49046916 49049107 Pvu2g1119 2 21912485 21914908 PCT