Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2688 ATGTCAGACATAGTGAAGCAACTGTTGGCAAAGCCGATCCAATTGGCTGACCAAGTCACCAAGGCGGCGGAAGAGGCCAGTTCCTCTTTCAAGCAAGAGTGCTTAGAACTCAAATCCAAGACAGAGAAACTCGCGGGGCTTCTTCGACAAGCAGCGCGTGCCAGCTCCGACCTGTACGAGCGTCCCACGCGGCGTATAATCGCCGACACCGAACTCGTGCTCGACAAGGCCCTGTCTTTGGTCCTGAAATGCCGCGCCAACGGCCTCATGAAGCGCGTGTTCAGCATCATTCCGACGGCGGCGTTTCGCAAGATGTCGTCCCAGCTCGAGAATTCCATCGGGGACGTGTCGTGGCTCCTCCGGGTTTCGGCTCCGGCGGAGGATCGCGGTGACGAGTATCTCGGCCTCCCTCCGATCGCCGCGAACGAGCCCATTTTGGGCCTCATTTGGGAGCAGGTGGCGACCCTCCACACGGGGTCTCTTGACGACCGATCTGACGCAGCCGCCTCGCTCGTGTCGCTGGCACGTGACAACGACCGGTACGGGAAGTTGATAATCGAGGAAGGTGGGGTTGGACCTTTGTTGAAGCTGATAAAGGAGGGTAAAAAAGAGGGTCAAGAGAACGCCGCCAGGGCTATTGGGCTTCTGGGTCGTGACCCTGAGAGCGTGGAGCTTATGATCCTTGCCGGGGTGTGCTCTGTGTTCGCCAAAGTCCTGAAAGAAGGTCCCATGAAAGTTCAAGCTGTGGTTGCCTGGGCCGTGTCTGAGTTGGCAGCTAAGTACCCAAAATGTCAAGATCTTTTTGCTCAGCATAATATCGTTCGCTTGCTTGTAAGTCATCTTGCTTTTGAAACCGTTCAGGAGCATAGTAAATACGCAATTGTTAGCAACAAACCCACATCAATCCATGCTGTTGTGATGGCTAGTAATAATTCTAATGGCAATACTTTGAAAAAGGAGAGTGAATATGAGGACAAGCTTATGCAAAGTCGCATGCAGCATCCCTTAGGTGATAAGTCCACAAATCAGATGCTTAAAGTGGTCACAAGTACCATGGCAATGCATGCTGCCAACAAGCAGCAGCAACAGTTAAGTCAAGACAATGAAGGGACTCAGAACTCACAGGGTGCTCCGCCAAAGGCCAATGGGAATAGTAATGGCAAGCAGAGCCATCAGTCCCACCAGCAAAGCTATACCTACTCTGGAATTAACATGAAGGGAAGGGAACTGGAGGACCCTGAGAATAAGGCTTACATGAAAGCAATGGCAGCAAGAGCCCTCCGGCAGCTCGCCAAGGGCAACGTAGCCATTTGTCGGAGCATCACTGAATCGAGGGCTCTGTTGTGCTTTTCCATTCTTCTTGAGAAAGGGTCTGAAGATGTGAAGTACAATTCTGCCTTGGCAGTGAAGGAGATAACGGCAGTGGCAGAAAAAGACGCAGAATTGAGAAGATCAGCTTTCAAACCCAACTCTCCCGCTTGCAAGGCAGTTGTTGATCAAGTGCTTAAGATCATTGAGAAGGAAGATACAAAACTCCTGATTCCTTGCATAAAGGCTATAGGGAATTTGGCAAGGACATTCCGGGCAACGGAGACAAGGATAATTGGTCCCTTGGTCCGGCTTCTTGACGAAAGAGGGGCAGAGGTGTCAAGGGAAGCAGCAATCTCTCTCACAAAATTTGCCTGCACGGAAAACTACCTCTGCCTTGATCACTCCAAGGCAATTATAAGTGCTGGTGGTGCAAAGCACTTGGTCCAGCTTGTGTATTTTGGAGAACAGACAGTTCAGATTTCAGCACTAGTTCTGCTCTCCTACATTGCATTGCATGTGCCAGACAGTGAGGAACTTGCTAAGGCCGAGGTTCTTGGAGTGCTTGAATGGGCTTCCAAGCAACCTAACGTGACGCAGGATGAAACTATCGATGCTTTGTTGCAGGAATCCAAAGGTAGGCTGGAGCTTTATCAGTCTAGAGGTTCAAGAGGATTCCAAAAATTACATCAATAG 2004 0.506 MSDIVKQLLAKPIQLADQVTKAAEEASSSFKQECLELKSKTEKLAGLLRQAARASSDLYERPTRRIIADTELVLDKALSLVLKCRANGLMKRVFSIIPTAAFRKMSSQLENSIGDVSWLLRVSAPAEDRGDEYLGLPPIAANEPILGLIWEQVATLHTGSLDDRSDAAASLVSLARDNDRYGKLIIEEGGVGPLLKLIKEGKKEGQENAARAIGLLGRDPESVELMILAGVCSVFAKVLKEGPMKVQAVVAWAVSELAAKYPKCQDLFAQHNIVRLLVSHLAFETVQEHSKYAIVSNKPTSIHAVVMASNNSNGNTLKKESEYEDKLMQSRMQHPLGDKSTNQMLKVVTSTMAMHAANKQQQQLSQDNEGTQNSQGAPPKANGNSNGKQSHQSHQQSYTYSGINMKGRELEDPENKAYMKAMAARALRQLAKGNVAICRSITESRALLCFSILLEKGSEDVKYNSALAVKEITAVAEKDAELRRSAFKPNSPACKAVVDQVLKIIEKEDTKLLIPCIKAIGNLARTFRATETRIIGPLVRLLDERGAEVSREAAISLTKFACTENYLCLDHSKAIISAGGAKHLVQLVYFGEQTVQISALVLLSYIALHVPDSEELAKAEVLGVLEWASKQPNVTQDETIDALLQESKGRLELYQSRGSRGFQKLHQ* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2688 667 Gene3D - 3 122 IPR036537 GO:0007166
Pvu3g2688 667 PANTHER ARMADILLO REPEAT ONLY 4 1 662 - -
Pvu3g2688 667 SUPERFAMILY ARM repeat 155 635 IPR016024 -
Pvu3g2688 667 MobiDBLite consensus disorder prediction 356 396 - -
Pvu3g2688 667 Pfam Armadillo/beta-catenin-like repeat 184 215 IPR000225 GO:0005515
Pvu3g2688 667 PANTHER - 1 662 - -
Pvu3g2688 667 Gene3D - 149 329 IPR011989 -
Pvu3g2688 667 Gene3D - 394 649 IPR011989 -
Pvu3g2688 667 SMART arm_5 568 608 IPR000225 GO:0005515
Pvu3g2688 667 SMART arm_5 177 218 IPR000225 GO:0005515
Pvu3g2688 667 SMART arm_5 490 525 IPR000225 GO:0005515
Pvu3g2688 667 SMART arm_5 219 259 IPR000225 GO:0005515
Pvu3g2688 667 SMART arm_5 434 474 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2688 Pvu-Chr3 48907424 48909427 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2688 - - gmx:100794693 1157.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2688 3 48907424 48909427 Pvu2g1119 2 21912485 21914908 PCT