Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2707 ATGTCAGACATAGTGAAGCAACTGTTGGCAAAGCCGATCCAATTGGCTGACCAAGTCACCAAGGCGGCGGAAGAGGCCAGTTCCTCTTTCAAGCAAGAGTGCTTAGAACTCAAATCCAAGACAGAGAAACTCGCGGGGCTTCTTCGACAAGCAGCGCGTGCCAGCTCCGACCTGTACGAGCGTCCCACGCGGCGTATAATCTACGACACCGAACTCGTGCTCGACAAGGCCCTGTCTTTGGTCCTGAAATGCCGCGCCAACGGCCTCATGAAGCGCGTGTTCAGCATCATTCCGACGGCGGCGTTTCGCAAGATGTCGTCCCAGCTCGAGAATTCCATCGGGGACGTGTCGTGGCTCCTCCGGGTTTCGGCTCCGGCGGAGGATCGAGGTGACGAGTATCTCGGCCTCCCTCCGATCGCCGCGAACGAGCCCATTTTGGGCCTCATTTGGGGCGCAGCCGCCTCGCTCGTGTCGCTGGCACGTGACAACGACCGGTGTGGGAAGATGATCATCGAGGAAGGTGGGGTTGGACCCTTGTTGAAGCTGATAAAGGAGGGTAAAAAAGAGGGTCAAGAGAACGCCGCCAGGGCTATTGGGCTTCTGGGCCGTGACCCTGAGAGCGTGGAGCTTATGATCCTTGCCGGGGTGTGCTCTGTCTTCGCCAAAGTTCTGAAAGAAGGTCCCATGAAAGTTCAAGCTGTGGTTGCCTGGGCCGTGTCTGAGTTGGCAGCTAAGTACCCGAAATGTCAAGATCTTTTCGCTCAGCATAATATCGTTCGCTTGCTTGTAAGTCATCTTGCTTTTGAAACCGTTCAGGAGCATAGTAAATACGCAATTGTTAGCAACAAACCCACATCAATCCATGCTGTTGTGATGGCTAGTAATAATTCTAATGGCAATACTTTGAAAAAGGAGAGTGAATATGAGGACAAGCTTATGCAAAGTCGCATGCAGCATCCCTTAGGTGATAAGTCCACAAATCAGATGCTTAAAGTGGTCACAAGTACCATGGCAATGCATGCTGCCAACAAGCAGCAGCAACAGTTCAATCAAGACAATGAAGGGACTCAGAACTCACAGGGTGCTCCACCAAAGGCCAATGGGAATAGTAATGGCAAGCAGAGCCATCAGTCCCACCAGCAAAGCTCTACCTACTTTGGAATTAACATGAAGGGAAGGGAACTGGAGGACCCTGAGAATAAGGCTTACATGAAAGCAATGGCAGCAAGAGCCCTCGCGCAGCTCGCCAAGGGCAACGTAGCCATTTCTCGGAGTATCACTGAATCGAGGGCTCTGTTGTGCTTTGCCATTCTCCTTGAGAAAGGGTCTGAAGATGTGAAGTACAATTCTGCCTTGGCAGTGAAGGAGATAACGGCAGTGGCAGAAAAAGACGCAGAATTGAGAAGATCAGCTTTCAAACCCAACTCTCCCGCTTGCAAGGCAGTTGTTGATCAAGTTCTTAAGATCATTGAGAAGGAAGATACAAAACTCCTGATTCCTTGCATAAAGGCTATAGGGAATTTGGCAAGGACATTCGGGGCAACGGAGACAAGGATAATTGGTCCCTTGGTCCGGCTTCTTGATGAAAGAGGGGCAGAGGTGTCAAGGGAAGCAGCAATCTCTCTCACAAAATTTGCCTGCACGGAAAACTACTTCTGCCTTGATCACTCAAAGGCAATTATAAGTGCTGGAGGTGCAAAGCACTTGGTCCATCTTGTGTATTCTGGAGAACAGACAGAACAGATTTCAGCACTAGTTCTGCTCTCCTACATTGCATTGCATGTGCCAGACAGTGAGGAACTTGCTAAGGCCGAGGTTCTTGGAGTGCTTGAATGGGCTTCCAGGCCACCTAAGGTGATGCAGGATGAAACCATCGAGGCTTTGTTGCAGGAATCCAAAGGTAGGCTGGAGCCATATCAGTCTAGAGATTCAACCGAATTTTTGATTTTTTTATAG 1956 0.5026 MSDIVKQLLAKPIQLADQVTKAAEEASSSFKQECLELKSKTEKLAGLLRQAARASSDLYERPTRRIIYDTELVLDKALSLVLKCRANGLMKRVFSIIPTAAFRKMSSQLENSIGDVSWLLRVSAPAEDRGDEYLGLPPIAANEPILGLIWGAAASLVSLARDNDRCGKMIIEEGGVGPLLKLIKEGKKEGQENAARAIGLLGRDPESVELMILAGVCSVFAKVLKEGPMKVQAVVAWAVSELAAKYPKCQDLFAQHNIVRLLVSHLAFETVQEHSKYAIVSNKPTSIHAVVMASNNSNGNTLKKESEYEDKLMQSRMQHPLGDKSTNQMLKVVTSTMAMHAANKQQQQFNQDNEGTQNSQGAPPKANGNSNGKQSHQSHQQSSTYFGINMKGRELEDPENKAYMKAMAARALAQLAKGNVAISRSITESRALLCFAILLEKGSEDVKYNSALAVKEITAVAEKDAELRRSAFKPNSPACKAVVDQVLKIIEKEDTKLLIPCIKAIGNLARTFGATETRIIGPLVRLLDERGAEVSREAAISLTKFACTENYFCLDHSKAIISAGGAKHLVHLVYSGEQTEQISALVLLSYIALHVPDSEELAKAEVLGVLEWASRPPKVMQDETIEALLQESKGRLEPYQSRDSTEFLIFL* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2707 651 MobiDBLite consensus disorder prediction 346 382 - -
Pvu3g2707 651 SUPERFAMILY ARM repeat 149 611 IPR016024 -
Pvu3g2707 651 PANTHER ARMADILLO REPEAT ONLY 4 1 647 - -
Pvu3g2707 651 SMART arm_5 553 593 IPR000225 GO:0005515
Pvu3g2707 651 SMART arm_5 419 459 IPR000225 GO:0005515
Pvu3g2707 651 SMART arm_5 475 510 IPR000225 GO:0005515
Pvu3g2707 651 SMART arm_5 162 203 IPR000225 GO:0005515
Pvu3g2707 651 SMART arm_5 204 244 IPR000225 GO:0005515
Pvu3g2707 651 Gene3D - 391 633 IPR011989 -
Pvu3g2707 651 Gene3D - 3 122 IPR036537 GO:0007166
Pvu3g2707 651 PANTHER - 1 647 - -
Pvu3g2707 651 Pfam Armadillo/beta-catenin-like repeat 168 200 IPR000225 GO:0005515
Pvu3g2707 651 Gene3D - 140 320 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2707 Pvu-Chr3 49046916 49049107 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2707 - - gmx:100794693 1053.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2707 3 49046916 49049107 Pvu2g1119 2 21912485 21914908 PCT