Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2427 GTAAACAATGTTGGAACAAATGTGAGGAAGCCAACAATAGAGTATACAACCGAAGAATATTCAAAATTGATGGCAACTAACTTGGACTCTGCATACCATCTGTGCCAACTTGCATATCCTCTTCTTAAAGAATCTGGAAATGGAAGTATTGTGTCCATTTCCTCCGTTGCAGGTCAGACAAGTGTAGGTTCTGGAGTCATTTATGCAGGAACTAAAGCTGCAATGGATCAGATTACCAAATATCTTGCATGTGAATGGGCGAAAGACAATATTAGGAGCAACAGTGTTGCACCCTGGTATACCAAAACATCACTTGCGGAACCTTTGCTTGCAAACAAAGAAATTGTTGAGGGGATAATATCTCGTACGCCAATAAAGCGAATTGCAGAAGCACATGAAGTGTCATCCTTGGTGACTTTCCTTTGCTTGCCAGCAGCTTCTTACATCACTGGACAGGTTATTTCTGTTGATGGAGGATTTACTGTCTATGGATTTCAACCCAGCGTGAGAATTACTTGA 519 0.4104 VNNVGTNVRKPTIEYTTEEYSKLMATNLDSAYHLCQLAYPLLKESGNGSIVSISSVAGQTSVGSGVIYAGTKAAMDQITKYLACEWAKDNIRSNSVAPWYTKTSLAEPLLANKEIVEGIISRTPIKRIAEAHEVSSLVTFLCLPAASYITGQVISVDGGFTVYGFQPSVRIT* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2427 172 Gene3D - 1 170 - -
Pvu1g2427 172 Pfam Enoyl-(Acyl carrier protein) reductase 1 161 - -
Pvu1g2427 172 PANTHER TROPINONE REDUCTASE 1 168 IPR045000 GO:0016491
Pvu1g2427 172 PRINTS Glucose/ribitol dehydrogenase family signature 42 58 IPR002347 -
Pvu1g2427 172 PRINTS Glucose/ribitol dehydrogenase family signature 68 87 IPR002347 -
Pvu1g2427 172 PRINTS Glucose/ribitol dehydrogenase family signature 89 106 IPR002347 -
Pvu1g2427 172 PRINTS Glucose/ribitol dehydrogenase family signature 124 144 IPR002347 -
Pvu1g2427 172 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 164 IPR036291 -
Pvu1g2427 172 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 1 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2427 Pvu-Chr1 49560384 49561374 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2427 1 167 Miscellaneous Gene Families AT2G29290 62.722 1.61e-71 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2427 K08081 - gmx:100819646 292.737
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2437 1 49620858 49624888 Pvu1g2427 1 49560384 49561374 ECH
Pvu8g1202 8 14388403 14390640 Pvu1g2427 1 49560384 49561374 ECH
Pvu1g2427 1 49560384 49561374 Pvu1g2427 1 49560384 49561374 ECH