Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1648 ATGAATGCTAGACGAGACAACCGTAACAATAGAGTTTCCCTTTTTGATGGTATCGAGGAGGGTGGCATCAGAGCACAATCTGTTTACTCATCTTCTCATGAAATTGATGAACATGATAACGAGCAGGCATTGGATGGACTGCAAGATAGAGTCAATCTGCTGAAAAGATTATCAGGTGATATCAACGAGGAAGTGGATAGCCATAACCGCATGCTGGATCGAATGGGGAATGATATGGATTCATCAAGAGGAGTCCTTTCGGGCACTATGGACAAATTTAAAATGGTATTTGAGACTAAATCCAGCCGGAGAATGTTTTCGCTTGTAGCATCCTTTGTTGTGATTTTTCTTATAATATACTATCTCACTAAGTAA 375 0.4 MNARRDNRNNRVSLFDGIEEGGIRAQSVYSSSHEIDEHDNEQALDGLQDRVNLLKRLSGDINEEVDSHNRMLDRMGNDMDSSRGVLSGTMDKFKMVFETKSSRRMFSLVASFVVIFLIIYYLTK* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1648 124 PANTHER BET1-LIKE SNARE 1-1 1 124 - -
Pvu1g1648 124 Gene3D - 42 105 - -
Pvu1g1648 124 SUPERFAMILY SNARE fusion complex 28 96 - -
Pvu1g1648 124 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 34 96 IPR000727 -
Pvu1g1648 124 PANTHER GOLGI SNARE BET1-RELATED 1 124 IPR039897 GO:0015031|GO:0030173
Pvu1g1648 124 CDD SNARE_Bet1 37 94 IPR039899 -
Pvu1g1648 124 SMART tSNARE_6 29 96 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1648 Pvu-Chr1 41803050 41808973 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1648 K08504 - gmx:100814836 237.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1648 1 41803050 41808973 Pvu1g1648 1 41803050 41808973 ECH
Pvu1g1648 1 41803050 41808973 Pvu7g2800 7 51035204 51039271 PCT
Pvu7g2010 7 43377778 43390941 Pvu1g1648 1 41803050 41808973 PCT