Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu7g2800 | ATGAGTTACAGAAGAGATAATCGTTCGTCCAGATCATCACTGGTAGATGGTTTTGATAATCTGGAGGAGGGTGGTCTAAGGGCTTCTTCCTCTTACTCACGTGAAATTAATGAGCATGATAATGATAAAGCCATAGAGAGTTTGCAGGACAAAGTTTCCTTTCTGAAACGATTAACTGGTGATATACACGAGGAGGTTGAGAGTCATAACCAGTTGCTTGATCGGGTGGGTAACAAAATGGATGCCTCAAGGGGTATGATGATGGGAACCATGGATCGATTCAAGAAGGTTTTTGAGAAGAAATCAGCGAGGAAAACGTGCTCATATGTGGGTTATTTCACAGTTGCCTTCATATTCATATACTATCTTATTAGAATCCTTGGATATTTTACACTTGGGTAA | 402 | 0.4005 | MSYRRDNRSSRSSLVDGFDNLEEGGLRASSSYSREINEHDNDKAIESLQDKVSFLKRLTGDIHEEVESHNQLLDRVGNKMDASRGMMMGTMDRFKKVFEKKSARKTCSYVGYFTVAFIFIYYLIRILGYFTLG* | 134 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu7g2800 | 133 | Gene3D | - | 42 | 106 | - | - | |
| Pvu7g2800 | 133 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 35 | 97 | IPR000727 | - | |
| Pvu7g2800 | 133 | PANTHER | GOLGI SNARE BET1-RELATED | 1 | 127 | IPR039897 | GO:0015031|GO:0030173 | |
| Pvu7g2800 | 133 | CDD | SNARE_Bet1 | 38 | 96 | IPR039899 | - | |
| Pvu7g2800 | 133 | PANTHER | BET1-LIKE SNARE 1-2 | 1 | 127 | - | - | |
| Pvu7g2800 | 133 | SUPERFAMILY | SNARE fusion complex | 34 | 97 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu7g2800 | Pvu-Chr7 | 51035204 | 51039271 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pvu7g2800 | K08504 | - | gmx:100818014 | 249.595 |
Event-related genes