Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2010 ATGAATGCTAGAAGAGATGGCCGTAACAACAGAGTTGCACTTTTTGATGGTATTGAGAAGGGTGGCATCAAAGCATCGTCTCTTTACTCAACTTCTTCCCATGAAATTGGTGAACTTGATAATGAACAAGCATTGGATGGATTGCAAGATAGAGTCAATCTGCTGAAAAGATTGTCAGGTGACATAAATGAGGAAGTGGATAGTCATAACCGAATGTTGGATCGGATGGCGAACGATATGGATTCTTCGAGAGGAATCCTCTCAGGCACTATGGATAAATTCAAAATGGTATTTGAAACAAAATCCAGCCGAAGAATGTTTTCACTTGTAGCATCCTTTGTTGTGGTTTTTCTTATAATATACTATCTGACTAGGTAA 378 0.3862 MNARRDGRNNRVALFDGIEKGGIKASSLYSTSSHEIGELDNEQALDGLQDRVNLLKRLSGDINEEVDSHNRMLDRMANDMDSSRGILSGTMDKFKMVFETKSSRRMFSLVASFVVVFLIIYYLTR* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2010 125 CDD SNARE_Bet1 38 95 IPR039899 -
Pvu7g2010 125 PANTHER BET1-LIKE SNARE 1-1 1 125 - -
Pvu7g2010 125 SUPERFAMILY SNARE fusion complex 28 97 - -
Pvu7g2010 125 Gene3D - 42 106 - -
Pvu7g2010 125 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 35 97 IPR000727 -
Pvu7g2010 125 PANTHER GOLGI SNARE BET1-RELATED 1 125 IPR039897 GO:0015031|GO:0030173
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2010 Pvu-Chr7 43377778 43390941 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2010 K08504 - gmx:100500329 220.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2010 7 43377778 43390941 Pvu7g2010 7 43377778 43390941 ECH
Pvu7g2010 7 43377778 43390941 Pvu1g1648 1 41803050 41808973 PCT