Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0586 ATGGAGTTGATGGGGTGTGGAAGGTTTAGGGGGTGCCTTGTTCTTGTGTTATGTATTGTACTGTTGGTGGGTCTAGTGAGTGGGATTGGTGTTAATTGGGGCACACAATTAACACACCCTTTGCCATCCTCCACTATGGTGAAAATGCTGAAGGACAATGGTATTCAGAAAGTTAAGCTTTTTGATGCTGACCCTGATATTTTAAATGCTCTAAAGAAGTCTGGGATTCAGGTAATGGTTGGTATACCAAATGAAATGCTCTACACATTGGCCAACAGTATGCAAGCTGCTGAAAGATGGGTTTCCAAGAATGTTTCAGCATATGTCTCATCTGGGGGAGTGGACATCAGGTATGTTGCAGTGGGAAATGAACCTTTCTTGTCAACTTACAATGGTTCATTCGAAGCCACAACACTTCCAGCTCTTCAAAACATCCAAGCAGCTCTTGTGAAAGCCAGTTTAGGCAACCAGGTTAAAGTCACTGTCCCTCTAAATGCTGATGTGTATCAGAGTGCACAAGTACCCTCTGATGGTGACTTCAGGCAAGACATCCATGATCTCATGGTGCAGATTGTCAAGTTCTTGAGCCAGAACAATGCTCCGTTTACCGTGAACATCTATCCTTTCATCAGTCTCTATGCAGATCCCAATTTTCCTGTTGATTATGCCTTTTTCAATGGCTTTCAGTCCCCCATAAATGACAATGGTAGAATCTATGACAATGTCTTTGATGCCAACCATGATACTCTAGTATGGGCGCTGCAGAAAAATGGTTTTGGAAACATGCCTATAGTTGTAGGAGAAGTTGGGTGGCCTACAGATGGAGATAGAAATGCAAACCTTCAATATGCTCAAAGGTTTAACCAAGGCTTCATGTCGCGCTACATGGCCGGAAAGGGGACACCAATGAGGCCTGGTCCTATGGATGCTTACTTGTTCAGTCTCCTAGATGAAGATTTCAAGAGCATTCAGCCAGGTAATTTTGAAAGACATTGGGGGTTGTTTTACTATGATGGACAACCCAAGTACCAGCTTAACATAGGATCAAGAACCAATGGCTTAGTAGGTGCAAATGGGATAGCATATCTGGGCAAAAAGTGGTGCATTTTGAAACCCTCAGCAAACCTCAATGATGACCAAGTGGCACCTAGTGTGTCTTTTGCTTGTCAAAATGCAGATTGTACAAGTCTTGGATATCAAACTTCATGTGGTAATTTAGATGTTCGTGGTAACATCTCTTTTGCATTCAATAGCTATTACCAAGTGAATGACCAGATTGACAGTGCATGCAAATTCCCTGGCCTTTCTGTTGTCACTGACAAAGATCCATCCACTGGAGATTGTAAATTCAAAATCATGATCCAGACAGATTCTGCTGGCCTGCATGGGAATGGGAGAATTTGGCATCTCAGAATACTACTCTTGGCATTTTTGTTTTTCACTCTTCTGTGA 1452 0.4256 MELMGCGRFRGCLVLVLCIVLLVGLVSGIGVNWGTQLTHPLPSSTMVKMLKDNGIQKVKLFDADPDILNALKKSGIQVMVGIPNEMLYTLANSMQAAERWVSKNVSAYVSSGGVDIRYVAVGNEPFLSTYNGSFEATTLPALQNIQAALVKASLGNQVKVTVPLNADVYQSAQVPSDGDFRQDIHDLMVQIVKFLSQNNAPFTVNIYPFISLYADPNFPVDYAFFNGFQSPINDNGRIYDNVFDANHDTLVWALQKNGFGNMPIVVGEVGWPTDGDRNANLQYAQRFNQGFMSRYMAGKGTPMRPGPMDAYLFSLLDEDFKSIQPGNFERHWGLFYYDGQPKYQLNIGSRTNGLVGANGIAYLGKKWCILKPSANLNDDQVAPSVSFACQNADCTSLGYQTSCGNLDVRGNISFAFNSYYQVNDQIDSACKFPGLSVVTDKDPSTGDCKFKIMIQTDSAGLHGNGRIWHLRILLLAFLFFTLL* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0586 483 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 17 460 IPR044965 GO:0004553|GO:0005975
Pvu1g0586 483 SMART X8_cls 366 450 IPR012946 -
Pvu1g0586 483 SUPERFAMILY (Trans)glycosidases 29 346 IPR017853 -
Pvu1g0586 483 Gene3D - 363 460 - -
Pvu1g0586 483 Gene3D Glycosidases 28 353 - -
Pvu1g0586 483 Pfam X8 domain 366 435 IPR012946 -
Pvu1g0586 483 Pfam Glycosyl hydrolases family 17 29 346 IPR000490 GO:0004553|GO:0005975
Pvu1g0586 483 ProSitePatterns Glycosyl hydrolases family 17 signature. 262 275 IPR000490 GO:0004553|GO:0005975
Pvu1g0586 483 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 5 17 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0586 Pvu-Chr1 6690019 6693309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0586 9 459 Glycoside Hydrolase AT4G31140 70.395 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0586 K19893 - gmx:100775918 884.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0586 1 6690019 6693309 Pvu9g1436 9 20443771 20445630 PCT
Pvu9g1023 9 15192376 15193125 Pvu1g0586 1 6690019 6693309 PCT