Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1436 ATGGCTCAAGTCGAATTTTCTACGTGGGGCCTTTGTTTGATGTTGGTGCTAGCTCATTACCAATTTCAAGATGCCCAAGGTGCAGAGTCTGTACCAGGTCTTGGCATCAATTGGGGTGCATTAGCATCCCACACTTTGAATCCTAATATTGTGGTGAATATGTTGAAAGACAATGGGTTCATGAAGGTAAAACTTTTCGATGCAGATCCTTGGACCGTGAGTACTTTGTCTGGAACAAACATTGAAGTCATGGTGGGAATTCCTAATGATCAATTGAGTAAATTTGCTGGAAGTAGCAGCAGTGCAGAAGATTGGGTCAAAGAAAACATCACCAAACATCTTCGTGGTCGTCATGAAACCGTAAACATCAGATACGTATCTGTTGGAAATGAACCATTCATGAAAGATTACAAGGGTGCGTATGTGCAGACCACATTCCCAGCAATGCAAAATATTTATAGGGCCATCGAGAAGGCTGGTTTTGGAGACACGGTGAAGGTTACTACAGCTTTGAATGCTGATGTTTATGAATCTCCTTCAAACAAGCCATCAGATGGAGATTTTAGGAGTGACATTCGTGACTCCATACAACAAATACTGAGTTTCCTTCACGAAACGAACTCGCCATTTCTTGTCAACATATACCCTTTCCTTAGTCTCTACCAGAATGACAATTTTCCAGAAGAATTTGCCTTCTTTGACGGTGAAGGAAGAACGGTTGAAGACAACAACGTGCAATATAACAACGCTTATGACGCAAATTTAGACACCCTTGTTTGGTCATTGAAAAAAGCTGGGTACCCTGACATGAGAATTGTGGTTGGTGAAATTGGATGGCCAACTGATGGTAACAAACATGCTAATAACAAAAATGCAAAAAGGTTCTACCAAGGGCTACTCAAGAATATGGCAAGCAAGCAGGGAACCCCACTTCGCCCTGGAGCCATGGAGATGTATCTATTTTCTCTCACTGATGAGAACATGAAGAGTATTGAACCTGGTAAATTTGAGCGTCACTGGGGAATTTTTGGCTACGATGGAAGTGCTAAGTTTCCTTTAGATTTTTCTGGTCAGGGACAAGACAAATGGCCTATAGCAGCCAAAGGGGTTGTGTACCAAGATCGTGTATGGTGTGTTCTAAGCAGTGATGTTAGGAACTTGAGCCTTGTACCAAGTGCACTGGACTATGCTTGTGCTGGTGCGGATTGCACAAGCTTAGGATATGGTTGTTCTTGCGATAATTTAGACCTGGCCACCAATGCTTCATATGCTTTCAACCAGTACTTTCAAACAAGGGACCAAAGTGTTGAGGCTTGTAATTTCAATGGGTTAGCCACTATTGTAAGTCAGGATCCATCCAAAGGAAGTTGCATATTCCCTGTAGAAATTGAGAGCAGTGGTGATGTGCTAAGAGCAATTCATACTCTCGGAACCCTTTTGATTGGATTGGCGTTGTTTTCTATGACATTTACGTAG 1476 0.4221 MAQVEFSTWGLCLMLVLAHYQFQDAQGAESVPGLGINWGALASHTLNPNIVVNMLKDNGFMKVKLFDADPWTVSTLSGTNIEVMVGIPNDQLSKFAGSSSSAEDWVKENITKHLRGRHETVNIRYVSVGNEPFMKDYKGAYVQTTFPAMQNIYRAIEKAGFGDTVKVTTALNADVYESPSNKPSDGDFRSDIRDSIQQILSFLHETNSPFLVNIYPFLSLYQNDNFPEEFAFFDGEGRTVEDNNVQYNNAYDANLDTLVWSLKKAGYPDMRIVVGEIGWPTDGNKHANNKNAKRFYQGLLKNMASKQGTPLRPGAMEMYLFSLTDENMKSIEPGKFERHWGIFGYDGSAKFPLDFSGQGQDKWPIAAKGVVYQDRVWCVLSSDVRNLSLVPSALDYACAGADCTSLGYGCSCDNLDLATNASYAFNQYFQTRDQSVEACNFNGLATIVSQDPSKGSCIFPVEIESSGDVLRAIHTLGTLLIGLALFSMTFT* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1436 491 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 5 473 IPR044965 GO:0004553|GO:0005975
Pvu9g1436 491 SUPERFAMILY (Trans)glycosidases 34 355 IPR017853 -
Pvu9g1436 491 Pfam X8 domain 377 446 IPR012946 -
Pvu9g1436 491 ProSitePatterns Glycosyl hydrolases family 17 signature. 270 283 IPR000490 GO:0004553|GO:0005975
Pvu9g1436 491 Gene3D - 370 466 - -
Pvu9g1436 491 SMART X8_cls 376 459 IPR012946 -
Pvu9g1436 491 Pfam Glycosyl hydrolases family 17 34 355 IPR000490 GO:0004553|GO:0005975
Pvu9g1436 491 Gene3D Glycosidases 33 362 - -
Pvu9g1436 491 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE-LIKE PROTEIN 5 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1436 Pvu-Chr9 20443771 20445630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1436 28 477 Miscellaneous Gene Families AT5G64790 54.667 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1436 - - gmx:100794658 851.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1436 9 20443771 20445630 Pvu9g1436 9 20443771 20445630 ECH
Pvu1g0586 1 6690019 6693309 Pvu9g1436 9 20443771 20445630 PCT