Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1023 ACCTATGACAATGTGTTTGATGCTAACCATGATACCTTAGTGTGGGCACTGCAAAAGAATGGCTTTGGAAACTTGCCTATAATTGTGGGGGAAATTGGATGGCCTACAGATGGAGACAGAAATGCAAACCTTCAGTATGCACAACATTTCAACCAAGGTTTCATGTCACGTTACATGTCTGGAAAAGGGACCCCGATGAGGCCTAGTCCTATAGATGCTTATTTGTTTAGTCTCATAGATGAAGATGCCAAAAGCATTCAGCCAGGGAACTTTGAGCGTCATTGGGGGATGTTTTACTTGGATGGAAAACCAAAATACCAACTTAATCTTGGGTCAGCACGAGGTAATGGGTTAGTAGGTGCTGATGGGGTTGATCAATTGGCTAAAAAATGGTGTGTTTTGAAACCCTCAGCAAATCTTAATGATGACCAAGTGGCACCTAGTGTGGCCTATGCTTGTCAAAATGCTGATTGCACTAGTCTTGGGTTTGGAACTTCATGTGGGAATTTAGATGTGCATGGTAACATCTCTTATGCTTTTAATAGTTACTATCAGGTAAATGACCAGATGGACAGTGCCTGCAAATTCCCTGGCCTTTCTATGATCACTGACAAGGATCCTTCTGTGGGAGATTGCAAGTTCAGAATCATGATTCAGACAGATTCTGCAGGGCTACATGGAAAAGTTGGATCTCTAACAACAGTGTTGTGCTCTTTTCTTCTTTTGCTGTGCTGTAATCTTTTGTTTTGA 750 0.4187 TYDNVFDANHDTLVWALQKNGFGNLPIIVGEIGWPTDGDRNANLQYAQHFNQGFMSRYMSGKGTPMRPSPIDAYLFSLIDEDAKSIQPGNFERHWGMFYLDGKPKYQLNLGSARGNGLVGADGVDQLAKKWCVLKPSANLNDDQVAPSVAYACQNADCTSLGFGTSCGNLDVHGNISYAFNSYYQVNDQMDSACKFPGLSMITDKDPSVGDCKFRIMIQTDSAGLHGKVGSLTTVLCSFLLLLCCNLLF* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1023 249 ProSitePatterns Glycosyl hydrolases family 17 signature. 25 38 IPR000490 GO:0004553|GO:0005975
Pvu9g1023 249 SMART X8_cls 130 214 IPR012946 -
Pvu9g1023 249 Pfam Glycosyl hydrolases family 17 2 109 IPR000490 GO:0004553|GO:0005975
Pvu9g1023 249 Gene3D Glycosidases 1 116 - -
Pvu9g1023 249 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 1 224 IPR044965 GO:0004553|GO:0005975
Pvu9g1023 249 Pfam X8 domain 130 200 IPR012946 -
Pvu9g1023 249 Gene3D - 126 224 - -
Pvu9g1023 249 SUPERFAMILY (Trans)glycosidases 1 109 IPR017853 -
Pvu9g1023 249 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 5 1 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1023 Pvu-Chr9 15192376 15193125 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1023 2 245 Glycoside Hydrolase AT4G31140 67.623 1.27e-124 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1023 K19893 - gmx:100796552 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1023 9 15192376 15193125 Pvu1g0586 1 6690019 6693309 PCT