Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1357 ATGGTTTCAAAAAATCAATTCTATCATATTTCATTGGCGTTGCTTTTCTGCATGGGATTCTGGGGTTTTCAAGTCACATGTCGCACTCTCCAAGATGATGTCTCCATGTATGAGAGGCATGAAGAATGGATGACTCGTTATGGCAGTGTGTACAAGGACCCTGAGGAAAGGGAAAAGCGTTTCAGGATATTCAAGAAAAATGTGAATTATATTGAAACCTTCAACAATGCTGCCAATAAACCTTACCAGCTAGGCACTAATCAATTTGCAGACCTCACCAACGAGGAATTCATAGCAGGCAGAAACAGATTCAAGGGGCACATGTGTTCCTCAATCCTAAGGACAACCACTTTTAAGTATGAAAATGTGACTACAATTCCGTCCACAGTAGACTGGAGGCAGAAGGGTGCAGTTACACCCGTGAAGGACCAAGGTCAATGTGGATGTTGTTGGGCGTTTTCAGCGGTTGCAGCAACTGAAGGAATCCATGCACTGACTTCTGGAAAATTGATCTCTTTGTCAGAACAAGAACTTGTTGACTGTGACACAAAAGGTGTGGACCAAGGGTGTGAAGGTGGTTTTATGGATGGTGCTTTCAAATTCATCATAAAAAATCATGGAATAAACACTGAAGTGAATTACCCCTATAAGGGTGTAGATGGAAAGTGCAATGCAAAGGCAGAAGCGGTGAATGGTGCAACCATTACTGGGTACGAAGATGTCCCCGTTAACAACGAAAGCGCCCTTGAGAAAGCTGTTAGCAGTCAACCAGTTTCTGTAGCAATTGATGCCAGTGGATCTGACTTTCAGTTTTACAAAAGTGGTGTGTTCAGTGGTTCGTGTGGAACTGAGTTGGATCACGGTGTTACTGCTGTGGGATATGGTGTTAGCGATGATGGGAAGAAGTATTGGTTGGTAAAGAACTCATGGGGAACAGAATGGGGTGAAGAAGGCTACATTAGGATGCAAAGAGATGTAGCTGCTGCAGAAGGACTCTGTGGGATAGCGATGATGGCATCTTATCCTACTGCATGA 1035 0.4367 MVSKNQFYHISLALLFCMGFWGFQVTCRTLQDDVSMYERHEEWMTRYGSVYKDPEEREKRFRIFKKNVNYIETFNNAANKPYQLGTNQFADLTNEEFIAGRNRFKGHMCSSILRTTTFKYENVTTIPSTVDWRQKGAVTPVKDQGQCGCCWAFSAVAATEGIHALTSGKLISLSEQELVDCDTKGVDQGCEGGFMDGAFKFIIKNHGINTEVNYPYKGVDGKCNAKAEAVNGATITGYEDVPVNNESALEKAVSSQPVSVAIDASGSDFQFYKSGVFSGSCGTELDHGVTAVGYGVSDDGKKYWLVKNSWGTEWGEEGYIRMQRDVAAAEGLCGIAMMASYPTA* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1357 344 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 303 322 IPR025661 -
Pvu11g1357 344 SMART pept_c1 126 343 IPR000668 GO:0006508|GO:0008234
Pvu11g1357 344 SUPERFAMILY Cysteine proteinases 33 343 IPR038765 -
Pvu11g1357 344 PANTHER - 23 343 - -
Pvu11g1357 344 SMART Inhibitor_I29_2 40 97 IPR013201 -
Pvu11g1357 344 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 285 295 IPR025660 -
Pvu11g1357 344 PRINTS Papain cysteine protease (C1) family signature 144 159 IPR000668 GO:0006508|GO:0008234
Pvu11g1357 344 PRINTS Papain cysteine protease (C1) family signature 287 297 IPR000668 GO:0006508|GO:0008234
Pvu11g1357 344 PRINTS Papain cysteine protease (C1) family signature 303 309 IPR000668 GO:0006508|GO:0008234
Pvu11g1357 344 Pfam Papain family cysteine protease 126 343 IPR000668 GO:0006508|GO:0008234
Pvu11g1357 344 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 144 155 IPR000169 -
Pvu11g1357 344 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 23 343 - -
Pvu11g1357 344 Pfam Cathepsin propeptide inhibitor domain (I29) 40 97 IPR013201 -
Pvu11g1357 344 Gene3D Cysteine proteinases 23 344 - -
Pvu11g1357 344 CDD Peptidase_C1A 127 342 IPR039417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1357 Pvu-Chr11 29571753 29572871 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1357 - K16292 gmx:100791826 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1357 11 29571753 29572871 Pvu11g1357 11 29571753 29572871 ECH
Pvu6g1868 6 28979036 28981289 Pvu11g1357 11 29571753 29572871 ECH
Pvu5g1032 5 29964993 29967074 Pvu11g1357 11 29571753 29572871 ECH