Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1045 ATGGCCAACCAAAACTCTTTCCCCCTCTATGAGAAACACTGGTACAAGCATACTTATAAAAGGGTAACGGAGAGTTTGCTCTTAATCCTTCTCTTGTTGCTGCTTGGCTACCGCGTTATCTCTGTCAACAACTACTCTTTCCCTTGGTTTGTTGCTTTTGTCTGCGAATCATGGTTCACCATCTCTTGGTTTTTCACCCTCGCCACTCAGTGGAGTCCAGCAGTAATCAAAACCTACCCAGAACGTCTCTTACAAAGTGTGCAGGATCTTCCACCAGTGGATTTGTTTGTGACAACAGCAGACTCTGTCCTTGAACCACCCATTATCACAGTGAACACTGTGTTGTCTCTGTTGGCACTTGATTACCCACCTCACAAGCTTGCTTGTTATGTTTCTGACGATGGTTGTTCCCCCCTAACTTTCTATGCTCTTCAAGAAGCCTCCAAATTTGCCAAGTTTTGGGTACCATTCTGTAAGAAATACGACGTGCAAATTAGAGCTCCATTCAGATACTTCTCTGACAAACTTGAGGTCTCCACGTCCAACAACACACCACAATTCAAACAAGAATGGTTACAAATGAAGGATATGTATGGTGATCTTAGCAGAAAAATAGAATTGGAAGCATCCCAAAAATCAAATCCAAATTATGGAGACTTTGCTGTTTTCTCAAACACTGAGAAGACAAATCATCCATCCATAATCAAGGTTATATGGGAGAACAAAGAAGAGCTTGAAGATGGGTTACCGCATTTGATCTATATATCTAGAGAGAAGAGGCCAAAACATTCTCATCATTTCAAAGCTGGTGCCATGAATGTTTTGACAAGAGTCTCGGGGTTGATAACCAATGCTCCCTTTATGTTGAACGTGGACTGTGACATGATTGTAAATAATCCAAAGATTGTTCATGATGCGTTGTGCATTTTACTTGATCCCAAAGGGCAAAAAGAAGTTGCATTTGCTCAATTTCCCCAACAATTCTATGCTACATTAAAGGACGACCCTTTTGGAAACCAGATGGCAATTTTGATTAAGTACTTTGCAACTGGATTAGCTGGACTGCAAGGGCCTTTCTACGCTGGAACAAACTGCTTCCATAGAAGAAAAGTTATTTATGGTCTTTCTCCAGATTACGTTCACAAGGGAAACAGCATATCAGAGGAGGAATTAAAACAAAAATTTGGAGCTTCAAAGGAGATAATGAAGTCAGCTGGTTGTGCTTTGGAAGGAAGAAGATATTCGCCAAATGCTGATAATATTGCTCAAGTTATTGACTTAGCAAGCCAAGTTGCTAGTTGTGGATATGAATATGGCACAGGATGGGGCAAACAGGTGGGTTGGATATATGGATCACTAACAGAGGATGTGCTGACTGGACTGACAATACATGAAAAAGGTTGGAGATCAGAATTGTGTACACCAAGGCCCATTGCCTTCACAGGCTTTGCTCCAGGAGGTGGCCCAACTACAATGGCCCAACAGAAGAGATGGGCCATAGGGTTGCTGGAGATCTTTTTAAGCAAGCACTGTCCTATATTTGCCACCCTTTTTCATAAGCTTACTTTCAGGCAGTGCATAGCATATATGTGGATTATGAATTGGGGGCTAAGACCATTCTTTGAAGTATGTTATGCGTCTCTTCTTGCACACTGCATCATCACCAACTCCAATTTCTTGCCACAGGAGCATGGCATATGTATTCCCGTTGCTTTTCTTGTAATTTACAAGGTATACACTGTATCAGTATATTTAGCAGAAGGGCTATCAGTTAAAGCATGGTGGAATAATCAAAGAATGTCAAGAATAACACCCATGAATGCTGGTTTTTGTGCTTTTCTCAGTGTCCTTCTTAAGAAATTAAGAATATCTGAAACTGTATTTGACATAACAAAGAAAGATTTACCCCCAACAGATGATGCTGGAGATGACAAAGATGCTGCCCGGTACACCTTCGATGAATCCCTAGTTTTCTTGCCAGGCACTACCATTTTATTGTTGCAGTTGACAGCAATAATGATCAAGCTATTAGGAATGCAAGCAGTGGTGGCAACTGAAAGCAAGAAGGATTGTGGAATTGGTGAGATTTTTTGTAGTGTTTATTTGATAATTTGCTATTGGCCATTTCTAAAGGGATTATTTGAGACAGGAAAGTATAGGATCCCCATGTCTACAATATACAAATCAACTATCTTAACATCTCTCTTTGTACACCTATCTAGAAACACTGTTGCTACTTGA 2241 0.4061 MANQNSFPLYEKHWYKHTYKRVTESLLLILLLLLLGYRVISVNNYSFPWFVAFVCESWFTISWFFTLATQWSPAVIKTYPERLLQSVQDLPPVDLFVTTADSVLEPPIITVNTVLSLLALDYPPHKLACYVSDDGCSPLTFYALQEASKFAKFWVPFCKKYDVQIRAPFRYFSDKLEVSTSNNTPQFKQEWLQMKDMYGDLSRKIELEASQKSNPNYGDFAVFSNTEKTNHPSIIKVIWENKEELEDGLPHLIYISREKRPKHSHHFKAGAMNVLTRVSGLITNAPFMLNVDCDMIVNNPKIVHDALCILLDPKGQKEVAFAQFPQQFYATLKDDPFGNQMAILIKYFATGLAGLQGPFYAGTNCFHRRKVIYGLSPDYVHKGNSISEEELKQKFGASKEIMKSAGCALEGRRYSPNADNIAQVIDLASQVASCGYEYGTGWGKQVGWIYGSLTEDVLTGLTIHEKGWRSELCTPRPIAFTGFAPGGGPTTMAQQKRWAIGLLEIFLSKHCPIFATLFHKLTFRQCIAYMWIMNWGLRPFFEVCYASLLAHCIITNSNFLPQEHGICIPVAFLVIYKVYTVSVYLAEGLSVKAWWNNQRMSRITPMNAGFCAFLSVLLKKLRISETVFDITKKDLPPTDDAGDDKDAARYTFDESLVFLPGTTILLLQLTAIMIKLLGMQAVVATESKKDCGIGEIFCSVYLIICYWPFLKGLFETGKYRIPMSTIYKSTILTSLFVHLSRNTVAT* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1045 746 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 2 745 - -
Pvu11g1045 746 SUPERFAMILY Nucleotide-diphospho-sugar transferases 108 547 IPR029044 -
Pvu11g1045 746 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 220 377 IPR029044 -
Pvu11g1045 746 PANTHER CELLULOSE SYNTHASE H1-LIKE PROTEIN 2 745 - -
Pvu11g1045 746 Pfam Cellulose synthase 93 382 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1045 Pvu-Chr11 11013341 11021423 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1045 1 740 Glycosyltransferase AT2G32530 44.401 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1045 - - gmx:100500469 1240.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1045 11 11013341 11021423 Pvu11g1045 11 11013341 11021423 ECH
Pvu5g1205 5 33639773 33641966 Pvu11g1045 11 11013341 11021423 PCT
Pvu11g1045 11 11013341 11021423 Pvu5g1206 5 33699932 33718365 PCT