Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1206 ATGTTTGTCAAACCTCTCTTCTTGAGCCAGGAGCAAAGCTTCAATGTCCTCAATAGTGTAGGGATCAAGACGGGACGTGACAGAGGTGATGAACGAATCATACTCCTCAGGAAGACCATCCAAGATGGCTTCAAGATGATCTTCTATGGAAACCTTAGAGCCAACAGCCGCAAGAGAATCGATAACCCGCTTGATGTCAAGAAGATAAATGCTGATAGACCGATCCCGCTTAGGGGTTTTCAACTGGTTTTGAGCTTGCGAACACGCGCACGGAAGGAGTATGAGAGCCTATGCAGTAAAATTATGAATGCAGCACAAAATTCGATTCCTCTCATAGGAGAATTTGCTATATTCTCAAATACACAGCTTCGAAATCATCCAACCATAATTAAGGTAATATGCGAAAACAAAGGTCTTTCAGACGAGTTGCCACACTTAGTCTACGTATCTAGAGAAAAGAAGAAGCAACATCCACATCATTATAAAGCTGGTGCCATGAATGTGTTGACAAGAGTTTCCGGAGTGATGACAAATGCTCCCTTTATCCTGAACGTAGATTGTGACATGTATGTTCATAATCCAAAGATTGTTCTGCACGCCCTCTGCATTTTACCAGATTCAAAGGGAGAGAAAGAAGTTGCATTTTCACAATGTATCCAACAATTCTACGATGCATTGAAGGATGACCCTTTTGGAAATCAACTTGTGGCAACGTTTTTTTACCTAGGTGGTGGATTAGCAGGACTCCAAGGGATATTTTACATAGGAACAAATTGCTTGCACCGAAGAAAAGTAATTTATGGCCTTTCTCCTGATCATCACATTCAAAATGGAAAGAAGGATCATGACATCACAAATGGGAAATTCTCAAAAAAGAAAAGAATATTTGGAAGTTCAAAGGGGTTTGTGGGATCAACTACTGATGCTTTGGAAGGGAAGACATTGGCTTCCAATAATAATATTTGGAAATATGTTGAGGCAGCAAAAGAAGTTGTCAGTTGTGAATATGAATATGACACTGCTTGGGGTAAAGAGGTGGGTTGGATGTACGGAACAACATCAGAAGATGCGCTTACAGGGCTGAAAATCCACACAAAAGGTTGGAGATTTGAAGTGTGTTCACCAGATCTTATAGCCTTTATGGGTTGCTCACCTAAAGATATCATAACTGTAATGGTCCAACAAAGAAGATGGGTCTCAGGGTTGCTTGAAATTCTCCTAAGCAACCACTGTCCAATTTTTGGAACCCTATTTGGTAAGCTTCAATTCAGACAATGCTTGGGCTATCTTTGGGTCACCACTTGGGGCTTAAGATGTGTTCCTGAAATATGCTACAGTCTTCTCCCTGCATATTGCATCATCAACAACTCTACTTTCTTGCCCAAGGATCTTGGACAATGGATTCCTACCACTTTGTTTGTGATTTACAACATAAGTACTTTTGTAGAGTACTTGGGAACAGGGTTGTCAATTCGTACATGGTGGAACTCTCAAAGAATGGCAAGGATAACCACCACAAATGCTTGGTTTTTTGGATTATTGAGCATTGTGCTTAAGTTATTGAGAATATCAGACATTGTCTTTGAAATAACAAGAAAAGAGCAATCATCATCCAACGAGAGTGCTAAGGAAAATAATGGTAGATTCATTTTCAACGAGTCTCCAATTTTTATACCTGGCACAACTATTTTGCTTATTCAACTAATAGCATTGGTTACCAAGTTGTTGGGATGGCAACCACGTGTTAGAAATGGACATGGATCTGGCATAGGAGAAGTGTTATGTTGTTCATATTTGGTTGTTTGCTACTCGCCATTTTTCAAAGGTTTATTTGGCAAAGGAAAATATGGAATTCCCTTATCCACGATATGCAAGTCAATGGTGTTGGCTTTCCTTTTTAATCTCCCTCTTTATGATAAATTTTGGGTGAAGCATACGTTTTCCAGAACAATGGATTCCTTGACTTTGCTCCTCCTCCTCTTGCTTCTTGGTTACCGTATTTTCTGCCATGACAGCTACACTTTCCCTTGCTTCGTTGCTGTCATATGCGAGTCATGGTTCACTTGCTTTTGGATTTTTATCATCAGCACCAAATGGTCTCCTGCATTCACCAAAACCCACATAGATCGTCTCTTGCTTCGGGTACCTGAGGCTGAGCTTCCAGCAGTGGACCTATTTGTGACAACTGCAGACCCAGTGCTTGAGCCACCTATCATCACAATCAACACTGTGTTGTCTCTGTTGGCACTTGATTATCCTGCAAACAAGCTAGCTTGCTATGTTTCTGATGATGGATGCTCCCCTCTTAACTTCTATGCCCTTCTGGAAGCTTCTAAGTTTGCTAAGCTTTGGGTGCCTTTCTGTAAGAACTACAACATTCAACTTAGAGTGCCCTTCAGATACTTCTCTCACAACACCAACCCTCCCAACACTGAACATTCCCAACAATTTATCCAAGACTGGCTAAGACTCAAGAAGGAGTATGAGAGTCTGTGCAGTAAAATTATGAATGCAGCAACAAATTCGATTCCTCTCATAGGAGAATTTGCTATATTCTCAAATACACAGCTTAGAAATCATCCAACCATAATTAAGGTAATATGCGAAAACAAAGGTCTTTCAGACGAGTTGCCACACTTAGTCTACGTATCTAGAGAAAAGAAGAAGCAACATCCACATCATTATAAAGCTGGTGCCATGAATGTGTTGACAAGAGTTTCCGGAGTGATGACAAATGCTCCCTTTATCCTGAACGTAGATTGTGACATGTATGTTCATAATCCAAAGATTGTTTTGCACGCCCTCTGCATTTTACTAGATTCAAAGGGAGAGAAAGAAGTTGCATTTTCACAATGTATCCAACAATTCTACGATGCATTGAAGGATGACCCTTTTGGAAATCAACTTGTGGCAACGTTTTTGTACCTAGGTGGTGGATTAGCAGGACTCCAAGGGATATTTTACATAGGAACAAATTGCTTGCACCGAAGAAAAGTAATTTATGGCCTTTCTCCTGATCATCACATTCAAAATGGAAAGAAGGATCATGACATCACAAATGGGAAATTCTCAGAAAAGAAAAGAATATTTGGAAGTTCAAAGGGGTTTGTGGAATCAGCTACTGATGCTTTGGAAGGGAAGACATTGGCTTCCAATAATAATATTTGGAAATATGTTGAGGCAGCAAAAGAAGTTGCCAGTTGTGAATATGAATATGACACTGCTTGGGGTAAAGAGGTGGGTTGGATGTATGGATCAACATCAGAAGATGCGCTTACAGGGCTGAAAATCCACACAAAAGGTTGGAGATCTGAAGTGTGTTCACCAGACCTTATAGCCTTTATGGGTTGCTCACCTCAAGATATCATAACTGTAATGGTCCAACAAAGAAGATGGGTCTCAGGGTTGCTTGAAATTCTCCTAAGCAACCACTGTCCAATTTTTGGAACCCTATTTGGTAAGCTCCAATTCAGACAGTGCTTGGGCTATCTTTGGGTCACCACTTGGGGCTTAAGATCTGTTCCTGAAATATGCTACAGTCTTCTCCCTGCATATTGCATCATCAACAACTCTACTTTCTTGCCCAAGGAACTTGGACAAGGGATTCCTACCACTTTGTTTGTGATTTACAACATAAGTACCGTTGTAGAGTACCTGGGAACAGGGTTGTCAATTCGAACATGGTGGAACTCTCAAAGAATGGCAAGGATAACCACCACGAATGCTTGGTTTTCTGGATTTTTGAGCATTGTTCTTAAGCTATTGAGAATATCAGACACTGTCTTTGAAATAACAAAAAAAGAGCAATCATCATCCAACGAGAGTGCTAAGGAAAACAATGGTAGATTCATTTTCAACGAGTCTCCAATTTTTATACCTGGCACAACTATTTTGCTTATTCAACTAATAGCATTGGTTACCAAGTTGTTAGGATGGCAACCACGTGTTAGAAATGGACATGGATCTGGCATAGAAGAAATGTTATGTTGTTCATATTTGGTTGTTTGCTACTGGCCATTTTTCAAAGGTTTATTTGGCAAAGGAAAATATGGAATTCCCTTATCCACGATATGCAAGTCAATGGTGTTGGCTTTCCTTTTTGTGTACTTTGGCAAAGCTTATTAA 4125 0.4017 MFVKPLFLSQEQSFNVLNSVGIKTGRDRGDERIILLRKTIQDGFKMIFYGNLRANSRKRIDNPLDVKKINADRPIPLRGFQLVLSLRTRARKEYESLCSKIMNAAQNSIPLIGEFAIFSNTQLRNHPTIIKVICENKGLSDELPHLVYVSREKKKQHPHHYKAGAMNVLTRVSGVMTNAPFILNVDCDMYVHNPKIVLHALCILPDSKGEKEVAFSQCIQQFYDALKDDPFGNQLVATFFYLGGGLAGLQGIFYIGTNCLHRRKVIYGLSPDHHIQNGKKDHDITNGKFSKKKRIFGSSKGFVGSTTDALEGKTLASNNNIWKYVEAAKEVVSCEYEYDTAWGKEVGWMYGTTSEDALTGLKIHTKGWRFEVCSPDLIAFMGCSPKDIITVMVQQRRWVSGLLEILLSNHCPIFGTLFGKLQFRQCLGYLWVTTWGLRCVPEICYSLLPAYCIINNSTFLPKDLGQWIPTTLFVIYNISTFVEYLGTGLSIRTWWNSQRMARITTTNAWFFGLLSIVLKLLRISDIVFEITRKEQSSSNESAKENNGRFIFNESPIFIPGTTILLIQLIALVTKLLGWQPRVRNGHGSGIGEVLCCSYLVVCYSPFFKGLFGKGKYGIPLSTICKSMVLAFLFNLPLYDKFWVKHTFSRTMDSLTLLLLLLLLGYRIFCHDSYTFPCFVAVICESWFTCFWIFIISTKWSPAFTKTHIDRLLLRVPEAELPAVDLFVTTADPVLEPPIITINTVLSLLALDYPANKLACYVSDDGCSPLNFYALLEASKFAKLWVPFCKNYNIQLRVPFRYFSHNTNPPNTEHSQQFIQDWLRLKKEYESLCSKIMNAATNSIPLIGEFAIFSNTQLRNHPTIIKVICENKGLSDELPHLVYVSREKKKQHPHHYKAGAMNVLTRVSGVMTNAPFILNVDCDMYVHNPKIVLHALCILLDSKGEKEVAFSQCIQQFYDALKDDPFGNQLVATFLYLGGGLAGLQGIFYIGTNCLHRRKVIYGLSPDHHIQNGKKDHDITNGKFSEKKRIFGSSKGFVESATDALEGKTLASNNNIWKYVEAAKEVASCEYEYDTAWGKEVGWMYGSTSEDALTGLKIHTKGWRSEVCSPDLIAFMGCSPQDIITVMVQQRRWVSGLLEILLSNHCPIFGTLFGKLQFRQCLGYLWVTTWGLRSVPEICYSLLPAYCIINNSTFLPKELGQGIPTTLFVIYNISTVVEYLGTGLSIRTWWNSQRMARITTTNAWFSGFLSIVLKLLRISDTVFEITKKEQSSSNESAKENNGRFIFNESPIFIPGTTILLIQLIALVTKLLGWQPRVRNGHGSGIEEMLCCSYLVVCYWPFFKGLFGKGKYGIPLSTICKSMVLAFLFVYFGKAY* 1375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1206 1374 Pfam Cellulose synthase 1026 1367 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pvu5g1206 1374 Pfam Cellulose synthase 279 635 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pvu5g1206 1374 Pfam Cellulose synthase 723 1015 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pvu5g1206 1374 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 853 1009 IPR029044 -
Pvu5g1206 1374 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 118 275 IPR029044 -
Pvu5g1206 1374 PANTHER CELLULOSE SYNTHASE H1-LIKE PROTEIN 635 1370 - -
Pvu5g1206 1374 PANTHER CELLULOSE SYNTHASE H1-LIKE PROTEIN 90 633 - -
Pvu5g1206 1374 SUPERFAMILY Nucleotide-diphospho-sugar transferases 737 1143 IPR029044 -
Pvu5g1206 1374 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 90 633 - -
Pvu5g1206 1374 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 635 1370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1206 Pvu-Chr5 33699932 33718365 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1206 91 633 Glycosyltransferase AT2G32530 43.517 5.68e-141 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1206 - - pvu:PHAVU_005G116500g 2801.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1206 5 33699932 33718365 Pvu5g1206 5 33699932 33718365 ECH
Pvu11g1045 11 11013341 11021423 Pvu5g1206 5 33699932 33718365 PCT