Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1205 TCAAATTTTACATACATCTTTCTAATATCTATTCCTATGGAAGTTTCAGTGCTTGCATTGCACGTTATATTAGAAAACAAGGAAGGTCTCTTTGATGGGTTGCCTTACTTAATCTATGTATCCAGAGAAAAGAGACCTCAGTACAATCACAATTACAAAGCCGGTGCTATGAATGTCTTGACAAGAGTCTCTGGATTGATGAGCAATGCTCCTTTTATGTTGAACGTAGACTGTGACATGATTGTGAACAATCCCAAGATTGTTCTACACGCTCTGTCTATTTTGATGGATTCACAAAAAGGGAAAGAAGTTGCTTTCGTTCAATGTTTCCAACAATTTATCGATGGAATAAAAGATGACCCTTTTGGAAATCAGTTGGTGATTGAATATGAGTACATAATACGGGGCATGGCTGGACTTCAAGGACCTTTATATGCAGGAACAAATACCTTCCATAGAAGAAATACTATTTACGGTCTTTATCCTCATGAAATTGAAACCGTTATAAAAGGAAAATCAGAAGAAAATATATTAATACAACAATTTGGAAGCTCAAAAGAGTTCATCAAATCAGCAACCCATGTTGTGGGAGGGAGTGGATATTCAGCTAATGATATTACTCCTTCCAACTTTATTGAGGCAGCAACCCAAGTTGCTAATTGTGAATATGAATGTGGCACTTTCTGGGGTAATCAGTTGGGCTGGTTGTATGGATCAATCTCAGAAGATGTACCAACAGGGTTGAATATTCACAGAAAAGGTTGGAGATCAGAGTGTTGTACCCCAGATCCAATTGCCTTCACAGGATGTGCTCCTGGAGGATTACTCTCTACAATGATACAACAAAAGAGATGGGCCTCAGGCCTTACTGTAGTCTTTTTTGGAAAGCATTCTCCTCTTATGGCCATGCTCTTTGATAAGATCCAATTCAGGACAGGCTTGTCTTATTTTTGGTCAACCAACTGGGGCTTGTGTGCTGCATTCCTAGTTTGCTATGTTGCTCTAATTGCATATTGCATGATTGCAAACACCAGTATCTTTCCTCAGGGACTTGGCCTTTGGATTGCAATTTCTCTTTTTGTGTTTTACAATATACATACTCTATTAGAGCACCTTACAATTGGGTTGTCTATAACAAATTGGTGGAACAATCAAAGAATGTGTGTAATGAGAACCACGACTGCATGGTTTATTGGATTTTTAAGCGCTATGCTTAAGCTATCAGGGATTTCAGATACTGTGTTTGAAATAACAGAGAAGGAACACACAACTTCTGGTGCTGATGGAAACAATGCAGATGCTGGAAGGTTCACATTCGACGAGTCTCCAGTTTTTGTGGTAGGCACGACGATTTTGTTGGTGCATTTGGCAGGCATGGTGATAAAGTTATTGGGGTTGCAACCAAGTGATAGTGGAAATGGGAGTGGAATAGGAGAGTTCATTTGTAGCACATATCTGATAGTGTGTTACTTTCCATATTTGAAAGGGTTGTTTGGCAGAGGAAAATATGGGATTCCCTTAACCACCATTTGCATGTCATCCGTGTTTGCATTAGTCTTT 1560 0.391 SNFTYIFLISIPMEVSVLALHVILENKEGLFDGLPYLIYVSREKRPQYNHNYKAGAMNVLTRVSGLMSNAPFMLNVDCDMIVNNPKIVLHALSILMDSQKGKEVAFVQCFQQFIDGIKDDPFGNQLVIEYEYIIRGMAGLQGPLYAGTNTFHRRNTIYGLYPHEIETVIKGKSEENILIQQFGSSKEFIKSATHVVGGSGYSANDITPSNFIEAATQVANCEYECGTFWGNQLGWLYGSISEDVPTGLNIHRKGWRSECCTPDPIAFTGCAPGGLLSTMIQQKRWASGLTVVFFGKHSPLMAMLFDKIQFRTGLSYFWSTNWGLCAAFLVCYVALIAYCMIANTSIFPQGLGLWIAISLFVFYNIHTLLEHLTIGLSITNWWNNQRMCVMRTTTAWFIGFLSAMLKLSGISDTVFEITEKEHTTSGADGNNADAGRFTFDESPVFVVGTTILLVHLAGMVIKLLGLQPSDSGNGSGIGEFICSTYLIVCYFPYLKGLFGRGKYGIPLTTICMSSVFALVF 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1205 520 PANTHER CELLULOSE SYNTHASE H1-LIKE PROTEIN 20 520 - -
Pvu5g1205 520 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 20 520 - -
Pvu5g1205 520 Pfam Cellulose synthase 175 518 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pvu5g1205 520 Pfam Cellulose synthase 32 167 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pvu5g1205 520 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 27 167 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1205 Pvu-Chr5 33639773 33641966 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1205 20 520 Glycosyltransferase AT2G32540 41.188 4.50e-129 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1205 - - pvu:PHAVU_005G1163000 978.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1205 5 33639773 33641966 Pvu5g1205 5 33639773 33641966 ECH
Pvu5g1205 5 33639773 33641966 Pvu11g1045 11 11013341 11021423 PCT