Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0693 TATGCTGTTGTGACAGGAGCAAACAAAGGGATTGGTTTTGGTGTGTGTAAGAAGTTGGCTTCAAATGGGATTGTGGTGGTGCTAACAGCTAGAGATGAGGGGAGGGGCTTGAAAGCTGTTGAAACACTGAAAGAGTTTGGTCTCTCAGACCTTCTGGTTTTTCATCAGCTTGATGTGGATGACCCTGCTAGTGTTGCTGCCTTGGCTCATTTCATCAAAACCAAATTTGGGAAACTTGATATCTTGAGAAATGGTGAAAAAGTTGATTGGAGTGAAGTAGGGTATCAAACATATGAGTTAGCTGAACAATGTGTGGAAACAAACTTCTATGGTGTGGAAAGGATAACTGAAGCTCTTATTCCCCTTCTCCAGCTATCCACTTCACCAAGAATTATCAATATTTCCTCCAGAGCAGGGCTCTTGAAGAACATACCTAATGAGTGGGCTAGAACAGTGTTCAGTGACATTGAAAACCTTACAATAGAAAAAATAGATAGGGTACTGAAAGAGTTTCAGAAAGATTTCAAAGAGGGATCATTGGAAATCAAAGGTTGGCCAGTTTTTGCTTCTGCTTATACAATGTCAAAAGCAGCTTTGAATGCTTACACAAGGATTATGGCCAAGAAAAATCCACATTTTCACATAAACTCTGTGTGCCCTGGCTTTGTCAAGACAGATATGAACAACAACACTGGACTATTAAGCATTGATGAAGGTTCTGAAACTCCTGTAATGTTGGCACTGTTGCCAAGTAATGTTCCTTCTGGTTGCTTCATTTCTCAGGGTGAAGTAGTGCCCTTTTGA 804 0.4067 YAVVTGANKGIGFGVCKKLASNGIVVVLTARDEGRGLKAVETLKEFGLSDLLVFHQLDVDDPASVAALAHFIKTKFGKLDILRNGEKVDWSEVGYQTYELAEQCVETNFYGVERITEALIPLLQLSTSPRIINISSRAGLLKNIPNEWARTVFSDIENLTIEKIDRVLKEFQKDFKEGSLEIKGWPVFASAYTMSKAALNAYTRIMAKKNPHFHINSVCPGFVKTDMNNNTGLLSIDEGSETPVMLALLPSNVPSGCFISQGEVVPF* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0693 267 PRINTS Glucose/ribitol dehydrogenase family signature 1 17 IPR002347 -
Pvu8g0693 267 PRINTS Glucose/ribitol dehydrogenase family signature 77 88 IPR002347 -
Pvu8g0693 267 PRINTS Glucose/ribitol dehydrogenase family signature 123 139 IPR002347 -
Pvu8g0693 267 PRINTS Glucose/ribitol dehydrogenase family signature 192 211 IPR002347 -
Pvu8g0693 267 PRINTS Glucose/ribitol dehydrogenase family signature 211 228 IPR002347 -
Pvu8g0693 267 Gene3D - 85 267 - -
Pvu8g0693 267 Gene3D - 1 84 - -
Pvu8g0693 267 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 1 84 - -
Pvu8g0693 267 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 83 267 - -
Pvu8g0693 267 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 263 IPR036291 -
Pvu8g0693 267 Pfam short chain dehydrogenase 2 142 IPR002347 -
Pvu8g0693 267 Pfam Enoyl-(Acyl carrier protein) reductase 183 231 - -
Pvu8g0693 267 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 83 267 - -
Pvu8g0693 267 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 1 84 - -
Pvu8g0693 267 CDD carb_red_PTCR-like_SDR_c 1 267 IPR045313 GO:0016616
Pvu8g0693 267 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 179 207 IPR020904 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0693 Pvu-Chr8 6163278 6164748 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0693 3 232 Acyl Lipid Metabolism Gene Families AT1G24360 22.222 8.08e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0693 K15095 - gmx:100789626 457.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0693 8 6163278 6164748 Pvu8g0693 8 6163278 6164748 ECH
Pvu8g0693 8 6163278 6164748 Pvu10g0993 10 34733591 34735973 PCT
Pvu10g0990 10 34708355 34711190 Pvu8g0693 8 6163278 6164748 PCT