Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00713 ATGGAGTTGATGGGGGGTGGAAAGTTTAGGGGGTGCCTTGTTTTCGTGTTCTTTGCTGCACTGTTGGTGGGTTTGGCGAGTGGAATTGGTGTTAATTGGGGCGCACAATTAACACATCCTTTGCCACCATCCACTGTGGTGAAAATGCTTAAGGACAATGGTATTCAGAAAGTTAAGCTTTTTGATGCTGACCCTGGTATTTTAGATGCACTAAAGAAGTCTGGGATTCAGGTGATGGTGGGTATACCAAATGACATGCTCTACACATTGGCTAACAGTATGCAAGCAGCTGAAAAATGGGTTTCCAAGAATATTTCAGCACATGTATCATCTGGGGGAGTGGACATCAGGTATGTTGCTGTGGGAAATGAACCTTTCTTGTCAACTTACAATGGTTCCTTTGAAGCCACAACACTTCCAGCTCTTCAAAACATCCAATCAGCTCTTGTGAAAGCTGGTTTAGGCAATCAGGTTAAAATCACTGTCCCTCTAAACGCCGACGTGTATCAGAGCGCACAAGTACCTTCTGATGGCGACTTCAGGCAAGACATCCATGATCTCATGGTGCAGATTGTCAAGTTCTTGAGCCAGAACAATGCTCCGTTTACCGTTAACATCTATCCTTTCATCAGCCTCTATGCAGATCCCAATTTTCCTGTTGACTATGCCTTCTTTAATGGTTTTCAGTCTCCTATAAATGACAATGGAAGGATCTATGACAATGTCTTTGATGCCAACCATGATACTCTAGTATGGGCACTGCAGAAGAATGGTTTTGGAAACATGCCTATAATTTTAGGAGAAGTTGGGTGGCCTACAGATGGTGACAGAAATGCAAACCTTCAATACGCACAACGCTTCAACCAAGGCTTTATGTCGCGCTACATCGCTGGAAAGGGGACACCAATGAGGCCTGGCCCTATGGATGCTTACTTGTTTAGTCTCATAGATGAAGATTTCAAAAGCATTCAGCCTGGTAATTTTGAAAGACATTGGGGGTTGTTTTACTATGATGGACAACCCAAGTACCAGCTTAACATAGGATCAAGAGCCAATGGCTTAGTAGGTGCTACTGGGGTGGCATATCTGCCCAAAAAGTGGTGCGTTTTGAAACCCTCAGCAAACCTCAATAGTGATCAAGTGGCACCAAGTGTGTCTTATGCTTGTCAAAATGCAGATTGCACAAGTCTTGGATATCAAACTTCATGTGGTGGTTTAGATGCTCTTGGTAATATTTCTTATGCATTCAATAGCTACTTCCAAGTGAATGACCAGATTGACAGTGCATGCCAATTCCCTGGCCTTTCTGTTGTCACTGGCAAAGATCCTTCAACTGGAGATTGCAAGTTCAGAATCATGATTCAGACAGATTCTGCTGGTCTACATGGGAATGGGAGAATTTGGTCTCTCAGAATAGTACTCTTTGTACTTTTGTTTTTCACTCTTATCTGA 1452 0.4311 MELMGGGKFRGCLVFVFFAALLVGLASGIGVNWGAQLTHPLPPSTVVKMLKDNGIQKVKLFDADPGILDALKKSGIQVMVGIPNDMLYTLANSMQAAEKWVSKNISAHVSSGGVDIRYVAVGNEPFLSTYNGSFEATTLPALQNIQSALVKAGLGNQVKITVPLNADVYQSAQVPSDGDFRQDIHDLMVQIVKFLSQNNAPFTVNIYPFISLYADPNFPVDYAFFNGFQSPINDNGRIYDNVFDANHDTLVWALQKNGFGNMPIILGEVGWPTDGDRNANLQYAQRFNQGFMSRYIAGKGTPMRPGPMDAYLFSLIDEDFKSIQPGNFERHWGLFYYDGQPKYQLNIGSRANGLVGATGVAYLPKKWCVLKPSANLNSDQVAPSVSYACQNADCTSLGYQTSCGGLDALGNISYAFNSYFQVNDQIDSACQFPGLSVVTGKDPSTGDCKFRIMIQTDSAGLHGNGRIWSLRIVLFVLLFFTLI 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00713 483 FunFam Glucan endo-1,3-beta-glucosidase 5 28 353 - -
Pumo9g00713 483 Gene3D - 363 459 - -
Pumo9g00713 483 SMART X8_cls 366 450 IPR012946 -
Pumo9g00713 483 Gene3D Glycosidases 28 353 - -
Pumo9g00713 483 FunFam Glucan endo-1,3-beta-glucosidase 8 362 459 - -
Pumo9g00713 483 ProSitePatterns Glycosyl hydrolases family 17 signature. 262 275 IPR000490 GO:0004553|GO:0005975
Pumo9g00713 483 Pfam Glycosyl hydrolases family 17 29 346 IPR000490 GO:0004553|GO:0005975
Pumo9g00713 483 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 18 439 IPR044965 GO:0004553|GO:0005975
Pumo9g00713 483 SUPERFAMILY (Trans)glycosidases 29 346 IPR017853 -
Pumo9g00713 483 Pfam X8 domain 366 435 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00713 Pumo-Chr9 13957076 13960164 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00713 13 459 Glycoside Hydrolase AT4G31140 71.205 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00713 K19893 - gmx:100790297 915.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00713 9 13957076 13960164 Pumo10g01604 10 21072688 21074587 PCT
Pumo10g00008 10 595449 599351 Pumo9g00713 9 13957076 13960164 PCT