Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00008 ATGGAGTTGATGGGGGGTGGAAAGTTTAGTAGGTTTGTTGTTATTGTTGTTGTTGTGTTGTTTGTGTCAGTGGGGTCAGTGAGTGGGATTGGTGTGAATTGGGGGACACAGTCGACACACCCTTTGTCACCGTCCAAGGTGGTGAAGATGCTGAAGGACAATGGCATTCAGAAGGTGAAGCTTTTTGATGCTGATCCTGGTATCTTGGATGCTCTCAAGAAGTCTGGGATACAGGTCATGGTGGGGATTCCAAATGACATGCTTTATACGCTGGCTAACAGTGTGGAAGCTGCTGAAAAATGGGTTTCCAAGAATGTTTCCAAACATGTCTCTTCTGGAGGAGTGGACATCAGGTACGTTGCAGTGGGGAATGAACCATTCTTGTCAACATACAATGGTTCCTTCGAAGCCACAACTCTTCCAGCTCTCCAAAACATCCAGGCAGCTCTCACAAAATCTGGTTTGAGCAACCGTGTCAAAGTCACCGTCCCCTTAAACGCTGACGTATACCAAAGCTCCTCAGAAAAGCCATCTGACGGCGGTTTCAGACCGGACATCAACAATGTCATGCTGCAGATTGTCAAGTTCCTGAACGACAACGGAGCTCCATTCACAGTGAACATCTACCCTTTCATCAGCCTCTACTCAGACCCCAATTTCCCGGTTGACTACGCCTTTTTCAACGGCTACCAGCCGGCTATAAATGACAACGGAAGAACCTACGACAACGTGTTTGATGCCAACCATGACACTCTAGTGTGGGCACTGCAGAAGAATGGCTTTGGAAACCTGCCTATAATTGTGGGGGAAATTGGTTGGCCCACAGATGGGGACAGAAATGCAAACCTTCAATATGCACAACGTTTTAACCAAGGTTTCATGTCACGTTACATGTCTGGAAAAGGTACCCCAATGAGGCCTGGTCCTATAGATGCTTATTTGTTTAGTCTCATAGATGAAGATGGCAAAAGCATTCAGCCAGGGAACTTTGAGCGTCATTGGGGCATGTTTTACTTTGATGGGCAACCCAAGTACCAACTCAACCTTGGGTCAGCACGAGGTAATGGGTTAGTAGGTGCTAGTGGAGTTGATCATTTGGCCAAAAAGTGGTGCGTTTTGAAATCCTCAGCAAACCTTAACAATGACCAAGTTGCACCTAGTGTGGCCTATGCATGTCAAAATGCTGATTGCACAAGTCTTGGGTATGGAACTTCTTGTGGCAATTTAGATGTGCATGGTAACATTTCTTATGCGTTTAATAGCTACTATCAGATAAATGACCAGATGGACAGTGCATGCAAATTCCCTGGCCTTTCCATGATCACTGACAAGGATCCTTCTGTTGGAGATTGCAAGTTCAGAATCATGATCCAGACAGATTCTGCGGAGCTACATGGAAAAGTTGGATATCTAACAACAGTGCTATGTTTTTTTGTACTTTTGCTATTCTGTAATCTTTGGTTTTGA 1467 0.4519 MELMGGGKFSRFVVIVVVVLFVSVGSVSGIGVNWGTQSTHPLSPSKVVKMLKDNGIQKVKLFDADPGILDALKKSGIQVMVGIPNDMLYTLANSVEAAEKWVSKNVSKHVSSGGVDIRYVAVGNEPFLSTYNGSFEATTLPALQNIQAALTKSGLSNRVKVTVPLNADVYQSSSEKPSDGGFRPDINNVMLQIVKFLNDNGAPFTVNIYPFISLYSDPNFPVDYAFFNGYQPAINDNGRTYDNVFDANHDTLVWALQKNGFGNLPIIVGEIGWPTDGDRNANLQYAQRFNQGFMSRYMSGKGTPMRPGPIDAYLFSLIDEDGKSIQPGNFERHWGMFYFDGQPKYQLNLGSARGNGLVGASGVDHLAKKWCVLKSSANLNNDQVAPSVAYACQNADCTSLGYGTSCGNLDVHGNISYAFNSYYQINDQMDSACKFPGLSMITDKDPSVGDCKFRIMIQTDSAELHGKVGYLTTVLCFFVLLLFCNLWF 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00008 488 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 21 442 IPR044965 GO:0004553|GO:0005975
Pumo10g00008 488 SMART X8_cls 369 453 IPR012946 -
Pumo10g00008 488 FunFam Glucan endo-1,3-beta-glucosidase 8 365 462 - -
Pumo10g00008 488 ProSitePatterns Glycosyl hydrolases family 17 signature. 264 277 IPR000490 GO:0004553|GO:0005975
Pumo10g00008 488 Gene3D Glycosidases 29 355 - -
Pumo10g00008 488 Gene3D - 365 463 - -
Pumo10g00008 488 Pfam Glycosyl hydrolases family 17 30 348 IPR000490 GO:0004553|GO:0005975
Pumo10g00008 488 SUPERFAMILY (Trans)glycosidases 30 348 IPR017853 -
Pumo10g00008 488 Pfam X8 domain 369 439 IPR012946 -
Pumo10g00008 488 FunFam Glucan endo-1,3-beta-glucosidase 5 29 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00008 Pumo-Chr10 595449 599351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00008 7 484 Glycoside Hydrolase AT4G31140 67.573 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00008 K19893 - gmx:100796552 920.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00008 10 595449 599351 Pumo9g00713 9 13957076 13960164 PCT