Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00258 ATGGAAACCAATACAACAGTAATAGCAAAGAAAGTGTGGAACATAATACGTGTGGCCTTCTTCATGTTGAGAAAAGGCATATCAAAGGGCAAGCTAATGATGCACCTCAACAACATGATGCTCAAACGCCGCGGCAAGCTCGCCGGCAAAGCCATCGCCAACCTCATGTTCCACCACCACCATGCCGCCGTCTCCGGCAACGACCTCCAATTCTCCGCCGCCAGGGAGTACGAGTTCAGCTGCAGCAACACACCCAACAACTTCTTTGCCGCCATTGGCGGCAACAACAACAAGCGCCACCGCCACAACCCCTTCTTCACGTGCGCTCACGCGCCACCCACCCTGGACGACGAGGCGGTGACCATTAATGTCGTTAAGGGCGTGTTGGAGATGCTGAAGAATGAGGCCATCGTGGAGGCTTCCCCTGCTGCGGCCGCGCTTCCCGGGTTCGGACGTAGCCCTATGGTGAGGCAGTTGATCAGGGTGACGGACTCTCCGTTCCCACTTCGTGACTCCGAGGATGACAAGGACAACCAAGTGGACAAGGCTGCGGAAGAGTTCATAAAGAGGTTCTACAAAGAGTTGAGGAAGCAGACTTGA 600 0.55 METNTTVIAKKVWNIIRVAFFMLRKGISKGKLMMHLNNMMLKRRGKLAGKAIANLMFHHHHAAVSGNDLQFSAAREYEFSCSNTPNNFFAAIGGNNNKRHRHNPFFTCAHAPPTLDDEAVTINVVKGVLEMLKNEAIVEASPAAAALPGFGRSPMVRQLIRVTDSPFPLRDSEDDKDNQVDKAAEEFIKRFYKELRKQT 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00258 199 Pfam Cotton fibre expressed protein 177 198 IPR008480 -
Pumo7g00258 199 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 6 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00258 Pumo-Chr7 2898280 2899070 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00258 - - gmx:100801941 311.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00258 7 2898280 2899070 Pumo4g04196 4 82883149 82884079 ECH
Pumo6g03173 6 74507129 74508399 Pumo7g00258 7 2898280 2899070 ECH
Pumo7g00258 7 2898280 2899070 Pumo7g00258 7 2898280 2899070 ECH
Pumo4g04196 4 82883149 82884079 Pumo7g00258 7 2898280 2899070 PCT