Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g03173 ATGGAAATCAAAGCAAGCCCAAGCCCACAAGAAGTGGTGGCAAGGAAACTATGGAACATAGTACGCATCGTATTCTTGATGTTGAGAAAAGGCATAGCCAAGAGCAAACTCGCCGTTGACTTCAACCTCAACTTGTTGCTCAAACGCGGCAAACTCGCGGCCACAAAGGCCATAGCCAACACCATCGTCACGCTCCACCTCCACCGCTCCCAAAACGACGACGCCGTTTACCCGCGCGACTACGAGTTCAGCTGCAGCAACAGCCCCTCCTTCTTACCCTCCTTCCACGTCACCAAACGCGGCAATAAGCACCGCAGGTTCCAATTCCCCCACCACGACGACGTTTCGACCGTTCAGAAAGTGCTTGAGATACTCAACAATAACAAGATCGAGGCTTCTCCGTTACCCGGGTTCGGGAAGAGTCCAATTGGGAGAAAACTCAGAATCACGGATTCACCTTTCCCTTTGAAGGATGAAGAAGCTGGGGACAACCAAGTTGACGTGGCAGCAGAGGAGTTTATCAAGAGGTTCTATAAGGACCTCAACTTGCAGCAGAAAATGGCTTCTATTGACTCACCCTACCACTATAACCGCTGGGACAGATGA 606 0.5099 MEIKASPSPQEVVARKLWNIVRIVFLMLRKGIAKSKLAVDFNLNLLLKRGKLAATKAIANTIVTLHLHRSQNDDAVYPRDYEFSCSNSPSFLPSFHVTKRGNKHRRFQFPHHDDVSTVQKVLEILNNNKIEASPLPGFGKSPIGRKLRITDSPFPLKDEEAGDNQVDVAAEEFIKRFYKDLNLQQKMASIDSPYHYNRWDR 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g03173 201 Pfam Cotton fibre expressed protein 163 190 IPR008480 -
Pumo6g03173 201 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 10 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g03173 Pumo-Chr6 74507129 74508399 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g03173 - - gmx:100783043 323.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g03173 6 74507129 74508399 Pumo7g00258 7 2898280 2899070 ECH
Pumo6g03173 6 74507129 74508399 Pumo4g04196 4 82883149 82884079 ECH
Pumo6g03173 6 74507129 74508399 Pumo6g03173 6 74507129 74508399 ECH
Pumo6g03173 6 74507129 74508399 Pumo6g03173 6 74507129 74508399 PCT