Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04196 ATGAAACCAATAGAAATGGAAAGTAACGCGCCAGTACTAGCGAAGAAAGTGTGGAGCATGGTACGCGTGGTGTTCTTCATGCTTCGAAAAGGCATATCGAAGGGGAAGCTCATGATGGACCTCAACATGATGCTCAAACGCCGAGGCAAGCTCGCCGGCAAAGCCATTGCCAACCTAATGTCCCACCACCACCACAACCACGGTGGGTCCCACGCCTCACACCTTCAGTTCTCTGCCCCAAGGGAGTACGAGTTCAGCTGCAGCAACACGCCCCACAACTTCTTCTTCCCCACAGCCAAACGCCACCGCCACTTCTTCGCGTGTGTCCACGCGCCTTCCACGCAGGACGACGACGTTGTGACGGTGAACGCCGTGAAGGCAGTGCTGGAGATGCTCAACAACAACAACGACGTTAAGGTTGAGGCGTCATCGTCCCCTGCACTGCCAGGGTTTGGACAGAGCCCTATGGTGAGGCAGCTTAGGGTTACGGACTCGCCGTTCCCGCTGCGAGACTCCGACCAAGACAACGACCACCAGGTTGATAAGGCGGCGGAAGAGTTCATTAAGAGGTTTTACAAGGAGTTGAACAAGCAGGCTTAA 600 0.5517 MKPIEMESNAPVLAKKVWSMVRVVFFMLRKGISKGKLMMDLNMMLKRRGKLAGKAIANLMSHHHHNHGGSHASHLQFSAPREYEFSCSNTPHNFFFPTAKRHRHFFACVHAPSTQDDDVVTVNAVKAVLEMLNNNNDVKVEASSSPALPGFGQSPMVRQLRVTDSPFPLRDSDQDNDHQVDKAAEEFIKRFYKELNKQA 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04196 199 Pfam Cotton fibre expressed protein 178 195 IPR008480 -
Pumo4g04196 199 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 9 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04196 Pumo-Chr4 82883149 82884079 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04196 - - gmx:100786928 332.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00258 7 2898280 2899070 Pumo4g04196 4 82883149 82884079 ECH
Pumo6g03173 6 74507129 74508399 Pumo4g04196 4 82883149 82884079 ECH
Pumo4g04196 4 82883149 82884079 Pumo4g04196 4 82883149 82884079 ECH
Pumo4g04196 4 82883149 82884079 Pumo7g00258 7 2898280 2899070 PCT