Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00176 ATGAGCTATGCACATTATCATATGGGCTCTGGTAGTAGAACTGCTCGGAGAAGTTTGGAGTTTGGGAAGACACATGTGGTGAGGCCAAAAGGAAAACACCAAGCTACTTTAGTTTGGCTGCATGGTCTTGGTGACAATGGTTTGAGCTCTTATCAGCTGCTGGAATCTCTTCCACTTCCAAATATAAAATGGATTTGCCCAACTGCTCCTACCCGCCCTGTAACCATACTTGGTGGTTTTTCTTGCACTGCATGGTTTGATATGGGAGACCTTTCAGAAGATGGTCCAGATGATTGGGAGGGTTTAGATGCCTCAGCAGCACATATTGCCAACTTGTTGTCAACAGAGCCAGCTGATGTGAAAGTAGGAATTGGAGGCTTCAGTATGGGTGCCGCAGTAGCTCAATACTCTGCAACTTGTTTTGCCATGGGAAGGTATGGAAATGGCATCACTTACCCTGTCAACTTAAGAGCAGTTGTTGGACTCAGTGGCTGGCTTCCGGGATCAAGGAGCTTAAGGAACAAGATTGAAGTGTCACATGAAGCAAGAAGGCGAGCTGCTTCGTTACCTGTTTTGCTGAGCCATGGAATCAGTGATGATGTAGTCCTCTACAAATACGGAGAGAAATCAGCTCAATCCTTAAGTTCAGCAGGGTTTCGATACATTACATTCAAATCCTATGATGGGCTTGGTCATTATACTGTTCCTAGGGAGATGGATGAGGTCTCCAATTGGCTTAGCTCAAGGCTGGGGCTTGGGGGATCCACATGA 771 0.4617 MSYAHYHMGSGSRTARRSLEFGKTHVVRPKGKHQATLVWLHGLGDNGLSSYQLLESLPLPNIKWICPTAPTRPVTILGGFSCTAWFDMGDLSEDGPDDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVAQYSATCFAMGRYGNGITYPVNLRAVVGLSGWLPGSRSLRNKIEVSHEARRRAASLPVLLSHGISDDVVLYKYGEKSAQSLSSAGFRYITFKSYDGLGHYTVPREMDEVSNWLSSRLGLGGST 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00176 256 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 255 - -
Pumo7g00176 256 Gene3D alpha/beta hydrolase 15 251 IPR029058 -
Pumo7g00176 256 SUPERFAMILY alpha/beta-Hydrolases 25 250 IPR029058 -
Pumo7g00176 256 Pfam Phospholipase/Carboxylesterase 24 247 IPR003140 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00176 Pumo-Chr7 1952421 1956216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00176 1 255 Acyl Lipid Metabolism Gene Families AT3G15650 72.453 3.83e-129 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00176 K06130 - gmx:100782153 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00176 7 1952421 1956216 Pumo4g04287 4 83909059 83914578 ECH
Pumo10g02358 10 34481905 34490261 Pumo7g00176 7 1952421 1956216 ECH
Pumo7g00176 7 1952421 1956216 Pumo7g00176 7 1952421 1956216 ECH
Pumo4g04287 4 83909059 83914578 Pumo7g00176 7 1952421 1956216 PCT