Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02358 ATGAGCTTTGCTGCGCCATCACTGGGTTCTGCTGGTGGTAGATCTGCTAGAAGAGCTTTTGAGTTTGGGAGAACCTATGTTGTCAGGCCTAAAGGTAAACACCAAGCAACTATAGTCTGGTTGCATGGCCTCGGGGATAATGGCTCCAGTTGGTCCCAGCTATTAGAGACCCTTCCTCTTCCAAATATTAAATGGATATGTCCAACTGCTCCTACTCAGCCAATATCTATATTTGGTGGCTTTCCGTCTACTGCTTGGTTTGATGTTGGAGACATTTCAGAAGATGCTGCTGATGATCTAGAAGGTTTGGATGCTTCAGCTGCACATGTAGCAAATTTGCTGTCTACAGAACCTGCAGACATTAAGCTTGGTGTTGGAGGGTTCAGTATGGGAGCAGCTACTGCCCTGTACTCTGTGTCCTGCTTTACTGCTGGAAAATATGGGAATGGCAATCCTTATCCAGCCAACATAAGTGCAGCTGTTGGTTTAAGTGGCTGGCTTCCATGCTCAAAGACCTTGAGTAACAAGTTACAAGGGGTAGATGAAGCTACAAGGCGTGCTCAATCCTTTCCTGTTTTGCTGTGTCATGGAAAAGGTGATGATGTTGTTCCCTATAAGTTTGGGGAGAAATCATCAAAGTGCTTAAGTTCAACTGGATTTCAGGATGTAACTTTTAAAGCTTATAACGGGCTTGGACACTACACAATTCCAGAAGAGATGGACGAGGTTTGTGCTTGGCTAACATCAAAATTGGGCCTTGAGGGCAATACTGCTTAG 777 0.4492 MSFAAPSLGSAGGRSARRAFEFGRTYVVRPKGKHQATIVWLHGLGDNGSSWSQLLETLPLPNIKWICPTAPTQPISIFGGFPSTAWFDVGDISEDAADDLEGLDASAAHVANLLSTEPADIKLGVGGFSMGAATALYSVSCFTAGKYGNGNPYPANISAAVGLSGWLPCSKTLSNKLQGVDEATRRAQSFPVLLCHGKGDDVVPYKFGEKSSKCLSSTGFQDVTFKAYNGLGHYTIPEEMDEVCAWLTSKLGLEGNTA 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02358 258 SUPERFAMILY alpha/beta-Hydrolases 26 251 IPR029058 -
Pumo10g02358 258 Pfam Phospholipase/Carboxylesterase 26 247 IPR003140 GO:0016787
Pumo10g02358 258 Gene3D alpha/beta hydrolase 17 252 IPR029058 -
Pumo10g02358 258 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02358 Pumo-Chr10 34481905 34490261 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02358 1 255 Acyl Lipid Metabolism Gene Families AT5G20060 74.510 2.28e-145 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g02358 K06130 - gmx:100796190 521.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g02358 10 34481905 34490261 Pumo7g00176 7 1952421 1956216 ECH
Pumo10g02358 10 34481905 34490261 Pumo4g04287 4 83909059 83914578 ECH
Pumo10g02358 10 34481905 34490261 Pumo10g02358 10 34481905 34490261 ECH