Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04287 ATGAGTCATGCACATTCTCATATGGGCTCCGGTAGTAGAACCACTCGAAGAGCTTTTGAGTTTGGGAAGACACATGTAGTGAGGCCAAAAGGAAAACACCAAGCCACAATAGTTTGGCTGCATGGTCTTGGTGATAATGGTTTGAGGTTTCACTTCTTTCAAATCCAAAAAGCTTGTCCTATTCTTGTTCTCTGTGCCATACCTCATTCTCTTGCTTCAGTGAAAGTTGGTATTGGAGGCTTCAGCATGGGTGCAGCAATAGCCCTATACTCTGCAACTTGTTTTGCTATGGGAAGGTATGGAAATGGCATCCCATACCCTGTCAACTTGAGAACAGTGGTTGGACTAAGTGGTTGGCTTCCCGGATCAAGGCTTGGTCATTACACGGTTCCTAGAGAGATGGATGAGGTTTGCACTTGGCTTAGTTCAAGGCTGGGGCTTGATGGAGTAATCAAGGTTCTGTTGCCTTTAGGCACGGAGGTTCGAAATTCTGTAGTGTTAACTGTGAGTGAGAGTGCTGAACCTGTGGTTCTGATCTCTGTAACTGGGGATTATCCCTAA 561 0.4563 MSHAHSHMGSGSRTTRRAFEFGKTHVVRPKGKHQATIVWLHGLGDNGLRFHFFQIQKACPILVLCAIPHSLASVKVGIGGFSMGAAIALYSATCFAMGRYGNGIPYPVNLRTVVGLSGWLPGSRLGHYTVPREMDEVCTWLSSRLGLDGVIKVLLPLGTEVRNSVVLTVSESAEPVVLISVTGDYP 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04287 186 Gene3D alpha/beta hydrolase 15 125 IPR029058 -
Pumo4g04287 186 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 49 - -
Pumo4g04287 186 SUPERFAMILY alpha/beta-Hydrolases 25 144 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04287 Pumo-Chr4 83909059 83914578 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04287 1 122 Acyl Lipid Metabolism Gene Families AT1G52700 47.619 5.76e-43 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04287 K06130 - gmx:100781212 184.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00176 7 1952421 1956216 Pumo4g04287 4 83909059 83914578 ECH
Pumo10g02358 10 34481905 34490261 Pumo4g04287 4 83909059 83914578 ECH
Pumo4g04287 4 83909059 83914578 Pumo4g04287 4 83909059 83914578 ECH
Pumo4g04287 4 83909059 83914578 Pumo7g00176 7 1952421 1956216 PCT