Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01702 ATGGCGGAAGTGAAGAGTGAAGACCCAGAAAAGGCAAATACTACAAATGTGAAAGAAGAAGAGTCTCCAATAGAGGAAGTGAGACTAACAGTGACGAACACCGACGACCCGACCCAACCGGTATGGACCTTCCGGATGTGGTTCCTCGGTCTGCTCTCGTGTTCTCTATTGTCCTTCCTCAACCAGTTCTTCGCGTACCGGACGGAGCCTCTCGTCATCACTCAGATCACCGTGCAGGTGGCGACGCTTCCCCTCGGCCACCTCATGGCGGCGGTCCTCCCCGCCGCCACGTTCCGGGTCCCCGGGTTCGGGTCGAAACGGTTCTCGTTCAACCCGGGTCCGTTTAACATGAAGGAACACGTGCTTATTACCATATTCGCCAATGCCGGTAGCGCGTTCGGGTCCGGGTCGCCCTACGCGGTGGGGATTGTTAACATTGTGAAAGCGTTTTATGGAAGGAAAATCTCGTTTATTGCTTCCTGGCTTCTCGTCATCACCACTCAGGTGTTAGGATACGGGTGGGCTGGGTTGCTGAGGAAGTACGTGGTTGAGCCTGCTCATATGTGGTGGCCCAGTACCCTCGTCCAGGTCTCTCTTTTCCGAGCTTTGCATGAGAAAGATGACCGCCGATTTTCACGGGCAAAGTTCTTCTTCATCGCACTAGTTTGCAGTTTTTCGTGGTATGTGATCCCTGGATACTTCTTCTCAACGCTCACAAACATATCATGGGTATGCTGGATATTCTCCAAGTCAGTCACGGCTCAGCAGCTAGGCTCAGGCATGAACGGCTTAGGACTTGGTGCACTCACACTTGATTGGTCTGCTGTAGCATCATTCTTGTTCAGCCCTCTTATCTCACCCTTCTTTGCCATTGTCAATGTTCTTGCTGGCTATGCAGTCATAGTGTATGTTGTGATCCCAATAGCATACTGGGGCCTCAATGTGTACAGTGCACATAGGTTTCCCATTTTCTCATCAGACTTGTTCACATCCCAAGGCCAAGAGTACAACATATCTGCTATTGTCAATGAAAAGTTTGAGCTGGATCTTGCCAAGTATCACCAACAAGGTCGAATTCATCTTAGTGTGTTTTTCTCTCTCACTTATGGATTTGGATTTGCCACCATAGCATCCACCCTTACACACGTTGCTTGCTTCTATGGAAGGGAGGTTATGGAGCGGTATCGTGCTTCAGCAAAGGGCAAAGAAGATATCCACACAAAACTGATGAAAAAATACAAAGACATACCTACTTGGTGGTTTTATGTGATGCTGGGCGTGACGCTTGTGGTTTCTCTCGTGCTATGCATCTTTCTAAATGACCAGATTCAGATGCCGTGGTGGGGACTTGTCTTAGCTTCAGCCTTGGCCTTTATATTTACACTCCCAATTAGCATCATAACTGCTACCACAAACCAGACACCAGGACTAAATATTATTACCGAGTATCTCTTTGGTATCATTTACCCCGGAAGACCAATAGCAAATGTATGCTTCAAAACCTATGGTTACATAAGCATGGCTCAAGCTGTCTCCTTCCTTAGTGATTTCAAGCTTGGTCACTACATGAAGATCCCTCCAAGGTCAATGTTTTTAGTTCAGTTCATTGGTACAGTGCTTGCTGGAACCATCAACATTGGTGTAGCATGGTGGTTGCTGAATTCCATCAACAACATATGTCATAGAGATCTCCTTCCTGAAGGCAGTCCCTGGACATGTCCAAGTGACCGCGTTTTCTTTGATGCATCAGTTATCTGGGGTCTGGTAGGACCTAGGAGGATCTTTGGTTCTCGTGGAAACTACCAAGCATTGAATTGGTTTTTCCTTGGAGGTGCAATAGGGCCAATACTAGTTTGGATATTGCACAAGGCATTCCCCAAGCAGTCATGGATTCCCTTGATCAATCTCCCAGTCCTTCTAGGGGCAACTGGAATGATGCCACCAGCAACACCACTGAACTACAATGCCTGGATTATAATTGGAACAATTTTCAACTTCTTTATCTTCCGGTACAGGAAGAAGTGGTGGCAGAGATACAACTATGTTCTATCAGCAGCACTTGATGCAGGGGTTGCTTTTATGGCTGTTCTGCTCTACTTCACACTAGACCTGGAAAATACAAGTCTCAATTGGTGGGGAACTGCTGGGGAGCATTGTCCTCTTGCAACTTGCCCAACAGCTAAGGGCATAGTGGTTGATGGTTGCCCTGTATATTGA 2217 0.4745 MAEVKSEDPEKANTTNVKEEESPIEEVRLTVTNTDDPTQPVWTFRMWFLGLLSCSLLSFLNQFFAYRTEPLVITQITVQVATLPLGHLMAAVLPAATFRVPGFGSKRFSFNPGPFNMKEHVLITIFANAGSAFGSGSPYAVGIVNIVKAFYGRKISFIASWLLVITTQVLGYGWAGLLRKYVVEPAHMWWPSTLVQVSLFRALHEKDDRRFSRAKFFFIALVCSFSWYVIPGYFFSTLTNISWVCWIFSKSVTAQQLGSGMNGLGLGALTLDWSAVASFLFSPLISPFFAIVNVLAGYAVIVYVVIPIAYWGLNVYSAHRFPIFSSDLFTSQGQEYNISAIVNEKFELDLAKYHQQGRIHLSVFFSLTYGFGFATIASTLTHVACFYGREVMERYRASAKGKEDIHTKLMKKYKDIPTWWFYVMLGVTLVVSLVLCIFLNDQIQMPWWGLVLASALAFIFTLPISIITATTNQTPGLNIITEYLFGIIYPGRPIANVCFKTYGYISMAQAVSFLSDFKLGHYMKIPPRSMFLVQFIGTVLAGTINIGVAWWLLNSINNICHRDLLPEGSPWTCPSDRVFFDASVIWGLVGPRRIFGSRGNYQALNWFFLGGAIGPILVWILHKAFPKQSWIPLINLPVLLGATGMMPPATPLNYNAWIIIGTIFNFFIFRYRKKWWQRYNYVLSAALDAGVAFMAVLLYFTLDLENTSLNWWGTAGEHCPLATCPTAKGIVVDGCPVY 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01702 738 Pfam OPT oligopeptide transporter protein 42 701 IPR004813 GO:0035673
Pumo6g01702 738 MobiDBLite consensus disorder prediction 1 23 - -
Pumo6g01702 738 NCBIfam small oligopeptide transporter, OPT family 19 708 IPR004648 GO:0055085
Pumo6g01702 738 PANTHER ISP4 LIKE PROTEIN 12 737 IPR004648 GO:0055085
Pumo6g01702 738 NCBIfam OPT family oligopeptide transporter 25 703 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01702 Pumo-Chr6 25667244 25673585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01702 18 737 Organic Solute Cotransporters AT5G64410 80.278 0.0 1240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01702 - - gmx:100819886 1417.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01702 6 25667244 25673585 Pumo2g01005 2 15107345 15113381 PCT
Pumo2g01004 2 15094372 15105602 Pumo6g01702 6 25667244 25673585 PCT