Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01004 ATGAGCTCAGTCGACCCAGAGAAGCCGGTTACCACCGAAGTGGTCGAAGACGATGAACTCTCTCCCATCGAAGAGGTTCGTCTCACGGTGACCAACACCGACGACCCGACCCAGCCCGTATGGACCTTCCGGATGTGGTTCCTGGGCCTTCTCTCGTGCTCCCTCCTCTCATTTCTCAACCAGTTCTTCGCTTACCGCACCGAACCTCTCATCATTAGTCAAATCACCGTTCAGGTCGCTACTCTCCCTATTGGCCACTTCATGGCCGCGGTTCTGCCCAAATCCAAGTTCACTATCCCCGGGTTCGGGCCCAAGACCTTCTCCTTCAACCCGGGCCCGTTTAACATGAAGGAGCACGTGCTTATTACTATATTCGCCAATGCCGGAAGCGCATTCGGATCCGGGTCGCCCTATGCCGTGGGTATTGTCAACATTATCAAAGCCTTTTACGGACGCAGCATCTCTTTTATTGCTTCTTGGCTTCTCATCATTACAACACAGGTGCTAGGATATGGATGGGCCGGGTTACTGAGGAAATACGTGGTGGAACCGGCCCATATGTGGTGGCCCAGCACCCTCGTCCAAGTCTCACTTTTCCGAGCATTGCATGAGAAAGATGACCACCGACTTTCACGGGCAAAGTTTTTCTTTATTGCACTAGTGTGCAGTTTTTCGTGGTACGTTGTCCCTGAATACTTGTTCACAACGCTCACAAGCATTTCATGGGTCTGTTGGGTATTCTCCAAGTCAGTTACAGCTCAGCAGATAGGCTCAGGCATGAGGGGCCTTGGAGTTGGGGCCATCACACTTGATTGGGCTGCTGTGGCATCATTCTTGTTCAGCCCTCTAATCTCACCATTCTTTGCCATTGTTAATGTTTTTGTGGGCTATGCCTTAATAGTCTACGTGGTGATTCCTATAGCATACTGGGGTCTCAATGTGTACAATGCCAATAGGTTTCCCATTTTCTCCTCACACTTGTTCACAGCCCAAGGTCAAAAATACAACATACCCAAGATTGTAGACAACCATTTTGAGCTAAATGTTGCAGAGTATGAAAAGCAAGGTAGAATTCATCTCAGTGTGTTTTTCGCTCTCACTTACGGCTTTGGATTTGCCACCATAGCATCCACCATCACACATGTTGTCTGCTTCTATGGAAGGGAGATTATGGAGCGCTATCGCGCATCTTCCAAAGGCAAAGAAGATATCCACACAAAATTGATGAAAAGATACAAAGACATACCTTCCTGGTGGTTTCATTCATTGCTTCTTGTGACAGTTGTGGTTTCTCTCGCCCTATGTATCTTTCTAAATGATCAGGTTCAGATGCCCTGGTGGGGACTTCTCTTTGCTGGAGCCCTAGCTTTTGGGTTTACCCTCCCCATTAGCATCATCACGGCCACCACAAACCAGACACCAGGATTGAATATCATCACCGAGTACGTCTTTGGTCTCATTTACCCTGGAAGACCAATAGCAAATGTATGCTTCAAAACCTATGGTTACATTAGCATGGCACAGGCTGTCTCTTTCCTCAGTGATTTCAAACTTGGGCACTACATGAAAATCCCTCCAAGATCAATGTTCTTAGTTCAGTTCATAGGCACAATGCTTGCTGGAACTATCAACATTGGGGTAGCATGGTGGTTGCTGAACTCTATCAATAACATATGTCATGATGATCTCCTTCCAGAAGGCAGTCCCTGGACATGCCCGGGTGACCGTGTATTCTTTGATGCATCAGTTATTTGGGGTCTGGTGGGACCAAAGCGAATCTTTGGTTCTCAAGGAAACTACAGTGCAATGAATTGGTTTTTCCTTGGAGGTGCATTAGGACCCATAATTGTTTGGCTATTCCACAAGGCATTTCCCAAACAGTCATGGATTCCACTAATCAACCTCCCAGTTCTCCTGGGAGCAACTGGAATGATGCCACCAGCTACACCATTGAACTACAATTCCTGGATTTTCGTTGGAACGATTTTCAACTTCTTTATCTTCCGTTACAGAAAGAAATGGTGGCAGAGGTACAACTATGTTCTGTCAGCAGCACTTGATAGTGGAGTTGCTTTTATGACTGTCTTGCTCTACTTCTCACTGGGTTTGGAAAACAAGAGTATAACATGGTGGGGAACTGATGGTGAACATTGTCCTCTGGCAGCTTGTCCAACAGCAAAGGGCGTAATAGTTGATGGTTGCCCAGCAAACTAG 2214 0.4697 MSSVDPEKPVTTEVVEDDELSPIEEVRLTVTNTDDPTQPVWTFRMWFLGLLSCSLLSFLNQFFAYRTEPLIISQITVQVATLPIGHFMAAVLPKSKFTIPGFGPKTFSFNPGPFNMKEHVLITIFANAGSAFGSGSPYAVGIVNIIKAFYGRSISFIASWLLIITTQVLGYGWAGLLRKYVVEPAHMWWPSTLVQVSLFRALHEKDDHRLSRAKFFFIALVCSFSWYVVPEYLFTTLTSISWVCWVFSKSVTAQQIGSGMRGLGVGAITLDWAAVASFLFSPLISPFFAIVNVFVGYALIVYVVIPIAYWGLNVYNANRFPIFSSHLFTAQGQKYNIPKIVDNHFELNVAEYEKQGRIHLSVFFALTYGFGFATIASTITHVVCFYGREIMERYRASSKGKEDIHTKLMKRYKDIPSWWFHSLLLVTVVVSLALCIFLNDQVQMPWWGLLFAGALAFGFTLPISIITATTNQTPGLNIITEYVFGLIYPGRPIANVCFKTYGYISMAQAVSFLSDFKLGHYMKIPPRSMFLVQFIGTMLAGTINIGVAWWLLNSINNICHDDLLPEGSPWTCPGDRVFFDASVIWGLVGPKRIFGSQGNYSAMNWFFLGGALGPIIVWLFHKAFPKQSWIPLINLPVLLGATGMMPPATPLNYNSWIFVGTIFNFFIFRYRKKWWQRYNYVLSAALDSGVAFMTVLLYFSLGLENKSITWWGTDGEHCPLAACPTAKGVIVDGCPAN 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01004 737 PANTHER ISP4 LIKE PROTEIN 15 735 IPR004648 GO:0055085
Pumo2g01004 737 Pfam OPT oligopeptide transporter protein 41 700 IPR004813 GO:0035673
Pumo2g01004 737 NCBIfam small oligopeptide transporter, OPT family 20 705 IPR004648 GO:0055085
Pumo2g01004 737 NCBIfam OPT family oligopeptide transporter 24 703 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01004 Pumo-Chr2 15094372 15105602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01004 11 737 Organic Solute Cotransporters AT5G64410 81.706 0.0 1263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01004 - - gmx:100811348 1418.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01004 2 15094372 15105602 Pumo2g01004 2 15094372 15105602 ECH
Pumo2g01004 2 15094372 15105602 Pumo6g01702 6 25667244 25673585 PCT