Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01005 ATGAGGTCTGATCCAGAGAACCCAGCCGCAAGCGAAATGGACGAAGATGATGAGGTGTCTCCGATTGAGGAGGTTCGGCTGACGGTGTCCAACACCGACGACCCGACCCAACCCGTATGGACCTTCCGGATGTGGTTCCTGGGTCTCCTCTCATGTTCGTTCATCTCCTTCCTTAACCAGTTCCTCGCCTACCACACTGAACCTCTCATTATAACTCAGATCACCGCTCTGGTCGTTACCCTCCCTATTGGGCACTTCATGGCCGCGGTTCTACCCAAAACCAAGTTCACTATCCCCGGGTTCGAGTCCAAGTCCTTCCCCTTTAACATGAAGGAGCACGTCCTCATTACCATATTCGCCAATGCCGGAAGCGCATTCGGAGCCGGACCGCCCTACGCCGTGGGTATTATCAACATTATCAAAGCCTTTTATGGACGGAACATCTCCTTTGTTGCTTCCTGGCTTCTCATCCTTACGACTCAGGTACTAGGATACGGATGGGCCGGCTTACTGATGAAGTACGTCGTGAAACCAGCCCATATGTGGTGGCCCACCACCCTCGTCCAGGTCTCACTTTTCCGAGCATTGCATGAGAAAGATGACCACCGAGTTTCACGGACAAAATTTTTCTTTTTTGCACAGTTGTGCAGTATGTCGTGGTACGTTGTCCCTGGATACTTGTTCACAACGCTCACAAGCATTTCATGGGTGTGTTGGCTATTCCCCAATTCAGTTACAGCTCAGCAGATAGGCTCAGGCATGAAGGGCCTTGGAGTTGGGGCTCTCACACTTGACTGGGCTGCTGTGGCATCATTCTTGTTCAGCCCTCTAATCTCACCTTTCTTTGCCATTGTCAATGTTTTTGTGGGTTATGCATTAGTAGTCTACGTTGTGATTCCTATAGCATACTGGGGCCTAAATGTGTACAATGCTAATAGGTTTCCCATTTTCTCCTCATACATGTTCACGGCCCAAGGTCAAAAATACGACATACCTGCTATCGTAGACAACAACTTTGAGCTAAATGTTGTCGAGTATGAAAAGCATGGTAGAGTACACCTTAATATGTTTTTCGCATTCGCTTACGGCTTTGGATTTGCCACCGTAGCATCCACCCTCACACATGTTGTCTGCTTCTATGGAAGGGAGATTATGGAGCGTTATCGCGCTTCTTTCAAAGGCAAAGAAGATATCCACACAAAATTGATGAAAAGATACAAAGACATACCTTCTTGGTGGTTTCATACATTGCTGGCTGTGACACTCGTGGTTTCTCTCGCACTATGCATCTTTTTAAATGACCAGGTTCAGATGCCCTGGTGGGGATTTCTCTTTGCTGGAGTCCTAGCTTTTGGATTTACTCTCCCCATTAGCATCATCACTGCCACCACAAACCAGACACCAGGATTGAATATCATCACCGAGTACGTCTTTGGTCTCATTTACCCTGGAAGACCAATAGCAAATGTATGCTTCAAAACCTATGGTTACATTAGCATGGCACAGGCCGTCTCTTTCCTTAGTGATTTCAAACTTGGGCATTACATGAAAATCCCTCCAAGATCAATGTTCTTAGTTCAGTTGATAGGCACAATGCTCGCTGGAACCATCAACATTGGGGTAGCGTGGTGGTTGCTGAACTCTATCAAGAACATATGTCATGATGATCTCCTTCCCGCAAACAGTCCCTGGACATGCCCGGGTGATCGTGTATTCTTTGATGCATCAGTTATTTGGGGTTTGGTAGGACCAAAGCGTATGTTTGGTTCCCAAGGAAACTACAGTGCAATGAATTGGTTTTTCCTTGGAGGTGCATTAGGACCCATAATTGTTTGGCTATTCCACAAGGCATTTCCCAAACAGTCATGGATTCCGCTAATCAACCTCCCAGTTCTCTTGGGAGCGACTGGAATGATGCCACCAGCAACACCATTGAACTACAATGCCTGGATTTTCGTTGGAACAATTTTCAACTTCTTTATCTTCCGTTACAGAAAGAAATGGTGGCAGAGGTACAACTATGTTCTGTCAGCAGCACTTGATAGTGGAGTTGCTTTTACGACCGTCTTCCTCTACTTCTCACTGGGTTTGGAAAACAAGAGTCTAACTTGGTGGGGAACTGATGGTGAACATTGTCCACTCGCAGCTTGCCCAACAGCAAAGGGCATAATTGTTGATGGTTGCCCTGCAAACTAG 2196 0.4681 MRSDPENPAASEMDEDDEVSPIEEVRLTVSNTDDPTQPVWTFRMWFLGLLSCSFISFLNQFLAYHTEPLIITQITALVVTLPIGHFMAAVLPKTKFTIPGFESKSFPFNMKEHVLITIFANAGSAFGAGPPYAVGIINIIKAFYGRNISFVASWLLILTTQVLGYGWAGLLMKYVVKPAHMWWPTTLVQVSLFRALHEKDDHRVSRTKFFFFAQLCSMSWYVVPGYLFTTLTSISWVCWLFPNSVTAQQIGSGMKGLGVGALTLDWAAVASFLFSPLISPFFAIVNVFVGYALVVYVVIPIAYWGLNVYNANRFPIFSSYMFTAQGQKYDIPAIVDNNFELNVVEYEKHGRVHLNMFFAFAYGFGFATVASTLTHVVCFYGREIMERYRASFKGKEDIHTKLMKRYKDIPSWWFHTLLAVTLVVSLALCIFLNDQVQMPWWGFLFAGVLAFGFTLPISIITATTNQTPGLNIITEYVFGLIYPGRPIANVCFKTYGYISMAQAVSFLSDFKLGHYMKIPPRSMFLVQLIGTMLAGTINIGVAWWLLNSIKNICHDDLLPANSPWTCPGDRVFFDASVIWGLVGPKRMFGSQGNYSAMNWFFLGGALGPIIVWLFHKAFPKQSWIPLINLPVLLGATGMMPPATPLNYNAWIFVGTIFNFFIFRYRKKWWQRYNYVLSAALDSGVAFTTVFLYFSLGLENKSLTWWGTDGEHCPLAACPTAKGIIVDGCPAN 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01005 731 Pfam OPT oligopeptide transporter protein 40 694 IPR004813 GO:0035673
Pumo2g01005 731 NCBIfam OPT family oligopeptide transporter 23 697 IPR004813 GO:0035673
Pumo2g01005 731 PANTHER ISP4 LIKE PROTEIN 11 729 IPR004648 GO:0055085
Pumo2g01005 731 MobiDBLite consensus disorder prediction 1 22 - -
Pumo2g01005 731 NCBIfam small oligopeptide transporter, OPT family 18 699 IPR004648 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01005 Pumo-Chr2 15107345 15113381 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01005 9 731 Organic Solute Cotransporters AT5G64410 77.610 0.0 1211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01005 - - gmx:100786741 1360.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01702 6 25667244 25673585 Pumo2g01005 2 15107345 15113381 PCT