Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03356 ATGGATGTGCTAACAACATTGACTGCAGATAAGCCAGTGGTGATCTTCAGCAAGAGCACTTGTTGTATGAGCCACACCGTGAAGGCTCTCATAAGCAGCTTTGGTGCCAACCATGAAGTTATTGAGGTTGACAAAATGCCAAGTGGACACCAAGTAGAGAGAGCACTGATTCAACTAGGTTGCCGCCCAAGTGTGCCTGCAGTGTTCATAGGACAACAATTCATTGGTGGTGCTGATGAAGTTATCAAACTCAACGTTCAAAACAAGCTTGCCCAATTGCTTCTTGGTGCTAAAGCTATATTTATATGGAGTAGGTAG 318 0.4434 MDVLTTLTADKPVVIFSKSTCCMSHTVKALISSFGANHEVIEVDKMPSGHQVERALIQLGCRPSVPAVFIGQQFIGGADEVIKLNVQNKLAQLLLGAKAIFIWSR 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03356 105 Pfam Glutaredoxin 13 75 IPR002109 -
Pumo5g03356 105 NCBIfam glutaredoxin-like family 6 101 IPR011905 -
Pumo5g03356 105 SUPERFAMILY Thioredoxin-like 2 99 IPR036249 -
Pumo5g03356 105 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Pumo5g03356 105 CDD GRX_GRXh_1_2_like 12 93 - -
Pumo5g03356 105 Gene3D Glutaredoxin 2 103 - -
Pumo5g03356 105 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Pumo5g03356 105 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Pumo5g03356 105 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Pumo5g03356 105 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03356 Pumo-Chr5 82700710 82702067 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03356 1 102 Miscellaneous Gene Families AT4G15690 46.078 2.34e-31 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03356 K03676 - gmx:100803979 194.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03356 5 82700710 82702067 Pumo3g02268 3 34713526 34716329 PCT
Pumo3g02269 3 34734568 34736160 Pumo5g03356 5 82700710 82702067 PCT