Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02269 ATGCTGAAAACCGTCTGCTGCATCTGTGGTCCAATCCTTGACGCGCTATTCCACCACTTTTTTTTTCGCATATTTTCGCTCCTTTTCTATTTTGTCTCTTCCTTAACCGCTTTTACTACATATATATTCCCCTTATCAAATCATCACAGGTCTAAAGGAACGTGTAATAATGTGGCTGAGTTTAGTGAGGATTCCAACAGAAATGTGATCATGGACCTAATCACTAGTATGGTAGCTGAAAGGCCTGTGGTGATCTTCAGCAAGAGCACATGTTGCTTGAGCCACTCCATGACCTCACTGATACGTAGCTTTGGCGCAAATCCCACTGTTTATGAGCTTGATGAAATGCCAAATGGAGAGCGGATTGAGAGGGCACTGCTTCAAATGGGGTCCCAGCCAAGTGTACCAACTGTGTTTATAGGACAACAATTCATTGGTGGGTCTAAAAGAATCATGAGCCTGCACCTTAGGAATGAGTTAGTACCACTGCTCATAAATGCCAGGGCTATATGGATTTGA 519 0.4335 MLKTVCCICGPILDALFHHFFFRIFSLLFYFVSSLTAFTTYIFPLSNHHRSKGTCNNVAEFSEDSNRNVIMDLITSMVAERPVVIFSKSTCCLSHSMTSLIRSFGANPTVYELDEMPNGERIERALLQMGSQPSVPTVFIGQQFIGGSKRIMSLHLRNELVPLLINARAIWI 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02269 172 PANTHER GLUTAREDOXIN 71 172 IPR011905 -
Pumo3g02269 172 ProSiteProfiles Glutaredoxin domain profile. 71 171 - -
Pumo3g02269 172 SUPERFAMILY Thioredoxin-like 71 171 IPR036249 -
Pumo3g02269 172 Gene3D Glutaredoxin 71 170 - -
Pumo3g02269 172 PRINTS Glutaredoxin signature 83 101 IPR014025 -
Pumo3g02269 172 PRINTS Glutaredoxin signature 128 141 IPR014025 -
Pumo3g02269 172 PRINTS Glutaredoxin signature 142 155 IPR014025 -
Pumo3g02269 172 Pfam Glutaredoxin 83 145 IPR002109 -
Pumo3g02269 172 NCBIfam glutaredoxin-like family 75 172 IPR011905 -
Pumo3g02269 172 CDD GRX_GRXh_1_2_like 82 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02269 Pumo-Chr3 34734568 34736160 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02269 71 172 Miscellaneous Gene Families AT4G15690 51.961 1.37e-37 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02269 K03676 - gmx:100811394 187.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02269 3 34734568 34736160 Pumo3g02269 3 34734568 34736160 ECH
Pumo5g03353 5 82655422 82656032 Pumo3g02269 3 34734568 34736160 PCT
Pumo3g02269 3 34734568 34736160 Pumo5g03356 5 82700710 82702067 PCT