Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03155 ATGCAGAGTGAGAACCAGAACAACCAGTTGGTAGTGCAGAATTCAGGGAGCCTCAGCTTCAGCAGCCATTTGTCCAAGGAAGATGAAGAGATGTCTAGGTCTGCTCTCTCCACCTTCAGGGCCAAGGAAGAAGAGATTGAAAGGAAGAAGATGGAGGTCAAAGAAAAGGTTCAGCTTCAGTTGGGTCGTGTTGAAGAAGAAAGTAAGCGTCTTGCAACCATTCGTGAGGAGCTTGAAGCCCTGGCAGATCCAATGAGGAAAGAAGTTGCACTTGTTCGAAAAAAGATTGATTCGGTAAACAAAGAATTAAAGCCACTGGGTCATGCCTGCCAGAAGAAGGAGAAAGAATACAAAGACGCCCTTGAAGCTTTTAATGACAAGAACAGGGAAAAAGTACAGCTAATCACCAAGTTAATGGAGTTGGTGAGTGAAAGTGAAAGATTGAGGATGAAGAAGCTGGAGGAGCTTAGTAAGAACATAGATTCCATGCAATGA 495 0.4404 MQSENQNNQLVVQNSGSLSFSSHLSKEDEEMSRSALSTFRAKEEEIERKKMEVKEKVQLQLGRVEEESKRLATIREELEALADPMRKEVALVRKKIDSVNKELKPLGHACQKKEKEYKDALEAFNDKNREKVQLITKLMELVSESERLRMKKLEELSKNIDSMQ 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03155 164 Pfam Transcriptional activator 13 162 IPR007033 -
Pumo5g03155 164 MobiDBLite consensus disorder prediction 1 22 - -
Pumo5g03155 164 Coils Coil 61 81 - -
Pumo5g03155 164 Coils Coil 110 130 - -
Pumo5g03155 164 Coils Coil 36 56 - -
Pumo5g03155 164 PANTHER RAB6-INTERACTING PROTEIN GORAB 4 162 IPR007033 -
Pumo5g03155 164 MobiDBLite consensus disorder prediction 23 40 - -
Pumo5g03155 164 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03155 Pumo-Chr5 80431437 80434683 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03155 - - gmx:100499923 297.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03155 5 80431437 80434683 Pumo3g01391 3 21965939 21968088 ECH
Pumo5g03155 5 80431437 80434683 Pumo5g03155 5 80431437 80434683 ECH
Pumo5g03155 5 80431437 80434683 Pumo11g01346 11 43425758 43428049 ECH