Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01391 ATGGGCCTAGTTTGCAGCACCAGAGAGGAAATGCAGAAAATGAAGAACCTTGGTAGCATTGGAAGCAGTGGGAGGCTATCAGCAGAAGAGTACGAGGATGAGGAGATTTCAAAACTGGCCATCTCCACATTTCAATCTAAGGAAGAAGAGATTGAGAGGAAAAAAATGGAGGTGAGAGAGAAAGTTGAACTTCAACTTGGTCGTGCTGAAGAAGAGACTAGGCGCTTGGCACACATTTGGGAAGAGCTTGAGGTGCTGCATGATCCCATGAGGAAGGAAGTTGCAATGGTACGCAAGAAGATTGACTTGGCTAACAGAGATTTAAAGCCACTGGGACTTAACTTCCAGAAAAAGGAGAAAGAGTATAAAGAAGCCTTGGAAGCTTTCAACGAAAAGAACAAAGAGAAGGCTCATCTAGTAGCCACACTAGTTGAGATGCTGACTGAGAGTGAAAGACTGAGGATGAAGAAACTGGAAGAGCTATGCAAGACCATAGAGTCTATGTCACTGAAACCATAA 519 0.4393 MGLVCSTREEMQKMKNLGSIGSSGRLSAEEYEDEEISKLAISTFQSKEEEIERKKMEVREKVELQLGRAEEETRRLAHIWEELEVLHDPMRKEVAMVRKKIDLANRDLKPLGLNFQKKEKEYKEALEAFNEKNKEKAHLVATLVEMLTESERLRMKKLEELCKTIESMSLKP 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01391 172 Pfam Transcriptional activator 15 167 IPR007033 -
Pumo3g01391 172 Coils Coil 115 135 - -
Pumo3g01391 172 Coils Coil 41 61 - -
Pumo3g01391 172 PANTHER RAB6-INTERACTING PROTEIN GORAB 9 167 IPR007033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01391 Pumo-Chr3 21965939 21968088 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01391 - - gmx:100794044 303.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03155 5 80431437 80434683 Pumo3g01391 3 21965939 21968088 ECH
Pumo3g01391 3 21965939 21968088 Pumo3g01391 3 21965939 21968088 ECH