Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01346 ATGGCAACACCAAAACAGTCATATGAACAGCAACAACAACAACAACCAAACATGCAGCGAGTGAGGAACTCGGGGATGATTAACTGCAACCAGAGTCCAATGAGGGATGACAAGGAAGAGGAGATGTCAAGATCAGCTCTGGCAATGTTCCGAGCGAAGGAAGAAGAAATTGAGAGGAAAAAAATGGAGGTGAGGGATAAGGTTCACACTTATCTCGGTCGAGTAGAGGAAGAAACAAAGCGCTTGGCTGAGATTAGAGAAGAGCTTGAGGGTCTCACAGATCCGTTGAGGAAGGAAGTTGCAATAGTTCGGAAGAAGATAGACAGTGTTAGCAAAGAGTTAAAGCCACTGGGCCAAACCTGCCAGAGAAAGGAGAGAGAATACAAGGAAGCCCTTGATGCTTTCAATGAGAAAAACAAGGAAAAAGCTCAACTTGTTACTAAACTAATGGAGCTGGTGACTGAAAGTGAGAGGTTGAGGATGAAGAAGCTGGAGGAGTTAAGCAAAAACGTAGATTCCCTGAACTGA 528 0.4451 MATPKQSYEQQQQQQPNMQRVRNSGMINCNQSPMRDDKEEEMSRSALAMFRAKEEEIERKKMEVRDKVHTYLGRVEEETKRLAEIREELEGLTDPLRKEVAIVRKKIDSVSKELKPLGQTCQRKEREYKEALDAFNEKNKEKAQLVTKLMELVTESERLRMKKLEELSKNVDSLN 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01346 175 MobiDBLite consensus disorder prediction 1 45 - -
Pumo11g01346 175 Coils Coil 164 175 - -
Pumo11g01346 175 Coils Coil 121 141 - -
Pumo11g01346 175 MobiDBLite consensus disorder prediction 1 31 - -
Pumo11g01346 175 Pfam Transcriptional activator 22 173 IPR007033 -
Pumo11g01346 175 PANTHER RAB6-INTERACTING PROTEIN GORAB 6 173 IPR007033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01346 Pumo-Chr11 43425758 43428049 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01346 - - ccaj:109798987 317.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01346 11 43425758 43428049 Pumo11g01346 11 43425758 43428049 ECH
Pumo5g03155 5 80431437 80434683 Pumo11g01346 11 43425758 43428049 ECH