Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03063 ATGGTTTTATATGAGCATTCAGATGTTTTTCAGTGGGGTCTTAATCTTCTTGATGGTGACCCTGCTTATAGTCCTGGATACTATGGCAACATAATTCAACATGATACTGGTGACATCTATAATGGACACTACTTCCATAGCCATTATGATAATGAATGTAACGATGTAGAGAATGATGAGATGATTGCTCGTACTCTTCAAGAAGAGTTTTCACAGCTAGAGATTGCCGAATCTTCAGGATATTTACAGGCAGGTGAAGAACAGTTCCATGTTCCTGAGACTCAGCCTGCATATGATTGGAATAACTCTTCAATGGTGAACTATTGTTCAGGAGGTCATGATTATGCCCAAGAAGGAGTTGGTAATGGAGAACCCTCTAGTTCATGTTCTAGTCCTTGTGAAACAGAGGAATATTCGTTAGAGCTAACTGACAATTACCCACTTGATGATGAAGTAGGGAGGAGATTGAGTCAAATGATACCAATTCCTCATGTTCCAAAAATTAATGGTGAAATTCCTTCAATTGACGAAGCAACTTCAGATCATCAAAGGCTTCTGGATAGATTGCAGTTATATGACTTTGTGGAGCACAAAGTACAAGGTGATGGTAATTGTCAGTTCCGGGCACTATCTGATCAATTGTATCACGCACCTGATCACCACAAGTTTGTGAGACGACAAGTTGTCAATCAGCTTAAATCTAATCCAGAGATTTATGATGGATATGTTCCCATGGAATATGATGACTATTTGGACAAGATGTCTAAGAGTGGCGAATGGGGTGATCATGTCACTCTCCAAGCAGCTGCAGATTCGTATGGTGTGAGAATATTTGTGATGACTTCTTTCAAGGACACCTGTTGCATAGAGATACTTCCTCATTTTGAGAAGCCAAAAGGAGTGATTTTCCTGAGTTTCTGGGCAGAGGTGCATTACAACTCCATTTATCCCCAAGGAGATATACCATCAAGTGAGTCTAGAAAGAAGAAAAGGTGGTGGAGCTTTGGCAGCAAGCATTAG 1020 0.4029 MVLYEHSDVFQWGLNLLDGDPAYSPGYYGNIIQHDTGDIYNGHYFHSHYDNECNDVENDEMIARTLQEEFSQLEIAESSGYLQAGEEQFHVPETQPAYDWNNSSMVNYCSGGHDYAQEGVGNGEPSSSCSSPCETEEYSLELTDNYPLDDEVGRRLSQMIPIPHVPKINGEIPSIDEATSDHQRLLDRLQLYDFVEHKVQGDGNCQFRALSDQLYHAPDHHKFVRRQVVNQLKSNPEIYDGYVPMEYDDYLDKMSKSGEWGDHVTLQAAADSYGVRIFVMTSFKDTCCIEILPHFEKPKGVIFLSFWAEVHYNSIYPQGDIPSSESRKKKRWWSFGSKH 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03063 339 ProSiteProfiles OTU domain profile. 194 318 IPR003323 -
Pumo5g03063 339 FunFam OTU domain-containing protein 176 322 - -
Pumo5g03063 339 Gene3D - 175 322 - -
Pumo5g03063 339 Pfam OTU-like cysteine protease 200 286 IPR003323 -
Pumo5g03063 339 PANTHER OTU DOMAIN CONTAINING PROTEIN 54 319 - -
Pumo5g03063 339 CDD OTU_plant_OTU9-like 185 316 - -
Pumo5g03063 339 SUPERFAMILY Cysteine proteinases 180 318 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03063 Pumo-Chr5 78789165 78794973 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03063 - - aip:107648617 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03063 5 78789165 78794973 Pumo3g01325 3 21015421 21020889 ECH
Pumo5g03063 5 78789165 78794973 Pumo5g03063 5 78789165 78794973 ECH
Pumo3g03245 3 59839035 59843543 Pumo5g03063 5 78789165 78794973 ECH
Pumo5g03063 5 78789165 78794973 Pumo3g03245 3 59839035 59843543 PCT