Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03245 ATGGGGTTATATGAGCATCCAGATGTTGTGCAGTGGGGTATTAATCTTTTTGACAGTGACCCTGCTTATAGCCCTGGATACTACAGTGATATAATTCAACATGATATCGGTGATGTCTATAATGGACACTACTACCATAGCCATTATGATGATACTGAAAGTAACCAAATACAAAATGATGAGATCATTGCACGGGCTCTTCAAGAAGAATTTTCCCGGCTAGATATTGCTGAGTGTTCAGGATATTCACAGACAGATGAAGAACAGTTCCATGCTTCTGAGCCTACATATGATTGGAATAACACATCGATGATGAACAATTGTTCAGGAGGTCATGATTATGCTTACAATGGAGTTGGTGACATAGAACCTTCTAGTTCATCATGTTGTAGTCCTTGTGAAGCAGAGGAATGCTCATTGGAGCTTACTGACAATTATCCACTTGATGATGAAATAGGGAGGAGATTGAGCCAGATGGTTCTAATTCCTCATGTTCCAAAAATTAATGGAGAAATTCCTTCAATAGATGAAGCAACTTCAGATCATCAAAGGCTTCTGGATAGATTGCAGTTATATGACTTTGTGGAGCATATGGTACAAGGTGATGGTAATTGTCAGTTCCGTGCGTTGTCTGATCAATTGTATAACACACCTGATCACCACAAGTATGTGAGAAAACAAGTTGTGAACCAGCTGAAGTCTCATCCAGAGATTTATGAGGGATATGTTCCCATGGAATATGGCGAATATTTGGAGAAGATGTCTAAGAGTGGTGAATGGGGGGATCATGTCAGCCTTCAAGCAGCTGCAGATTCGTATGGTGTGAGAATATTTGTGATGACTTCTTTCAAGGACACCTGTTGCATAGAGATACTTCCTCATTTTGAGAAGCCAAAAGGAGTGATTTTCCTTAGTTTTTGGGCAGAGGTGCATTACAACTCCATCTATCCTCAAGGAGATATACCTTCAAGTGAGTCGAGAAAGAAGAAAAGGTGGTGGAACTTTGGGACTAAGCATTAA 1020 0.401 MGLYEHPDVVQWGINLFDSDPAYSPGYYSDIIQHDIGDVYNGHYYHSHYDDTESNQIQNDEIIARALQEEFSRLDIAECSGYSQTDEEQFHASEPTYDWNNTSMMNNCSGGHDYAYNGVGDIEPSSSSCCSPCEAEECSLELTDNYPLDDEIGRRLSQMVLIPHVPKINGEIPSIDEATSDHQRLLDRLQLYDFVEHMVQGDGNCQFRALSDQLYNTPDHHKYVRKQVVNQLKSHPEIYEGYVPMEYGEYLEKMSKSGEWGDHVSLQAAADSYGVRIFVMTSFKDTCCIEILPHFEKPKGVIFLSFWAEVHYNSIYPQGDIPSSESRKKKRWWNFGTKH 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03245 339 FunFam OTU domain-containing protein 176 322 - -
Pumo3g03245 339 Gene3D - 175 322 - -
Pumo3g03245 339 PANTHER OTU DOMAIN CONTAINING PROTEIN 55 319 - -
Pumo3g03245 339 CDD OTU_plant_OTU9-like 185 316 - -
Pumo3g03245 339 Pfam OTU-like cysteine protease 200 286 IPR003323 -
Pumo3g03245 339 SUPERFAMILY Cysteine proteinases 180 318 IPR038765 -
Pumo3g03245 339 ProSiteProfiles OTU domain profile. 194 318 IPR003323 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03245 Pumo-Chr3 59839035 59843543 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03245 - - gmx:100811851 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g03245 3 59839035 59843543 Pumo5g03063 5 78789165 78794973 ECH
Pumo3g03245 3 59839035 59843543 Pumo3g01325 3 21015421 21020889 ECH
Pumo3g03245 3 59839035 59843543 Pumo3g03245 3 59839035 59843543 ECH
Pumo5g03063 5 78789165 78794973 Pumo3g03245 3 59839035 59843543 PCT