Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01325 ATGGGAACACATGACATGGATCCCGATGTTGTTCGCTGGGGTCTTCATCTCCTAGATGTTTGCACACTTTCCCACCGTGGTTCGCCTAGTATTGTAACTCAATATGATCCTGATTTAAGTCAAGTTGAATATGTTAGAGAAGGCTTTTGTCAGCATGAGTATGTGGATAATGATGAGGCTGTTGCACGAGCTTATCAAGAAGAATTATCGCAACTCGATTCCATGGGAGCTTCTGGGATATCCAATTTTGAGAATGAAGGAATGCAAGGATCTGTTTATACACAAGATTGGCCTCATTCTTCAAATGGAAACTATAACTTTGGCAATGAGTCTTGCCGGAACTCTGTAGATGATTCCTATAATATGAAAGAAGTGGAGAATTATGGACGACCAACTCCAAGTGAAAGGGAAAATGGTGTGCATGAAAATGATGTTTATGGTTCGTCTTCTGGGTCAGTAGAGGTACCTGTTACAAGTGATGACTTCTGGGATTCGTTGGAAATATCGGATGAATCTTCTCTTGATGGTGAAGTTGGCAAAAGATTAAACCAGATGGTTCCCATTCCTCATGTTCCTAAAACCAATGAAAAAATACCATCTGACGATGAAGAAATATCAGATCATCAAAGGCTTCTAGGACAGTTATATGATCTGATTGAATGCAAGGTTCAAGGAGATGGTAACTGCCAGTTCCGTTCTTTATCAGATCAACTCTATCGTTCTCCGGACCACCACAAATTTGTGCGAGAGCAAATTATTCAACAGCTCAAATCTTACCCAGATCTATATGCTGGTTATGTTCCCATGGCTTATAGTGATTATTTGAAAAAGATAAGCAAGAGTGGTGAATGGGGTGATCATGTCACATTGCAGGCTGCTGCAGATTGGTATGGTGTCAAAATTTTTGTTATTACATCTTTTAAGGACACATGTTACATCGAGATTCTTCCACAGATACAGAAGTCTGGAAGAGTGATATTTCTGAGCTTTTGGGCAGAGGTTCATTACAACTCAATTTATCCAGAAGGAGAATTTCCCTCATCTCATACAAAGAAAAAGAAGAAATGGTGGAATTTCGGTGGCTAG 1086 0.3987 MGTHDMDPDVVRWGLHLLDVCTLSHRGSPSIVTQYDPDLSQVEYVREGFCQHEYVDNDEAVARAYQEELSQLDSMGASGISNFENEGMQGSVYTQDWPHSSNGNYNFGNESCRNSVDDSYNMKEVENYGRPTPSERENGVHENDVYGSSSGSVEVPVTSDDFWDSLEISDESSLDGEVGKRLNQMVPIPHVPKTNEKIPSDDEEISDHQRLLGQLYDLIECKVQGDGNCQFRSLSDQLYRSPDHHKFVREQIIQQLKSYPDLYAGYVPMAYSDYLKKISKSGEWGDHVTLQAAADWYGVKIFVITSFKDTCYIEILPQIQKSGRVIFLSFWAEVHYNSIYPEGEFPSSHTKKKKKWWNFGG 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01325 361 Gene3D - 200 346 - -
Pumo3g01325 361 PANTHER OTU DOMAIN CONTAINING PROTEIN 56 343 - -
Pumo3g01325 361 FunFam OTU domain-containing protein 202 346 - -
Pumo3g01325 361 Pfam OTU-like cysteine protease 224 310 IPR003323 -
Pumo3g01325 361 ProSiteProfiles OTU domain profile. 218 342 IPR003323 -
Pumo3g01325 361 CDD OTU_plant_OTU9-like 208 340 - -
Pumo3g01325 361 SUPERFAMILY Cysteine proteinases 183 341 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01325 Pumo-Chr3 21015421 21020889 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01325 - - gmx:100820379 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03063 5 78789165 78794973 Pumo3g01325 3 21015421 21020889 ECH
Pumo3g03245 3 59839035 59843543 Pumo3g01325 3 21015421 21020889 ECH
Pumo3g01325 3 21015421 21020889 Pumo3g01325 3 21015421 21020889 ECH