Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02713 ATGGCGATCAAAGAAGATGTGGAGGATGGCACACAGAGAGAGCCACTTGTGGGGGAACAGAACCACCCGCTGGTCCATGCAAGCAAAGGGCCTCCATGGATGGTTTACTTTACTACATTCATTGCAGTGTGTGGTTCTTATGAATTTGGGGCTTGTGCTGGATATTCATCTCCCACTCAGGATGCTATCAGGAAGGATCTCAGTCTGTCTTTGGCAGAGTACTCCTTGTTTGGATCCATCTTGACTTTTGGTGCAATGGTTGGTGCAATAACAAGTGGGCCTATTGCTGATTTTATTGGACGTAAAGGGGCAATGAGAGTGTCAAGTGCTTTCTGTGTCGCAGGGTGGCTTGTTATTTATTTTTCCGAGGGCCCGGTGCCTTTGGACATTGGGAGGCTAGCAACAGGATATGGAATGGGAGTTTTTTCATATGTGGTTCCTGTCTTTGTAGCAGAAATTGCACCAAAAGAACTCCGAGGGACACTGACTACCTTAAATCAGTTCATGATTGTTGCTGCCGTGTCTGTGTCATTCATAATTGGAAATGTACTTTCATGGAGGGCTTTAGCTTTAATTGGCCTCATTCCCACTGCTGTATTGCTTTTGGGTCTGTTTTTCATTCCGGAGTCTCCTAGATGGCTGGCAAAGAGAGGACGTCAAAAAGATTTTGAGGCAGCACTGCAAATACTTCGTGGCAAAGATGCTGATATATCTGAGGAGGCAGAGGAAATTCAGGATTATATAACTACTTTGGAGCGGCTCCCAAAATCCAGGCTGCTGGAATTGTTTCATAGAAGATATTTGCGATCAGTCACTATTGGACTTGGGCTTATGGTCTGCCAGCAGTTTGGGGGAATTAATGGAATTTGCTTTTATGCCAGCAGTATTTTTGAGCTAGCAGGATTTTCTCCAACCATCGGGACTATAACATATGCTTGCCTTCAGATCGTGATCACAGGTCTTGGAGCAGCCTTCATAGATAAAGCTGGCAGGAAGCCCTTACTTCTGTTATCCGGATCGGGATTGGTTGCCGGATGTATATTTGCAGCAGTTTCATTCTATCTCAAGGTTCACGAGGTGGGTGTTGAGGCAGTCCCAGCACTTGCCGTAACAGGCATACTGGTTTACATAGGATCATTTTCAATAGGAATGGGAGCAATTCCATGGGTTGTGATGTCTGAGATATTTCCTGTCAATATTAAAGGGATAGCGGGAAGTGCAGCCACATTAACGAACTGGTTTGGTGCATGGTTATGTTCCTATACTTTCAACTTCCTCATGAGCTGGAGCTCCTATGGTACCTTCATTCTTTATGCAGCGATTAATGCACTGGCTATATTATTTATAATTGTTGTGGTGCCAGAAACCAAGGGTAAAAGCTTGGAACAATTACAAGCAGCCATTAACTCATAG 1413 0.4459 MAIKEDVEDGTQREPLVGEQNHPLVHASKGPPWMVYFTTFIAVCGSYEFGACAGYSSPTQDAIRKDLSLSLAEYSLFGSILTFGAMVGAITSGPIADFIGRKGAMRVSSAFCVAGWLVIYFSEGPVPLDIGRLATGYGMGVFSYVVPVFVAEIAPKELRGTLTTLNQFMIVAAVSVSFIIGNVLSWRALALIGLIPTAVLLLGLFFIPESPRWLAKRGRQKDFEAALQILRGKDADISEEAEEIQDYITTLERLPKSRLLELFHRRYLRSVTIGLGLMVCQQFGGINGICFYASSIFELAGFSPTIGTITYACLQIVITGLGAAFIDKAGRKPLLLLSGSGLVAGCIFAAVSFYLKVHEVGVEAVPALAVTGILVYIGSFSIGMGAIPWVVMSEIFPVNIKGIAGSAATLTNWFGAWLCSYTFNFLMSWSSYGTFILYAAINALAILFIIVVVPETKGKSLEQLQAAINS 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02713 470 ProSitePatterns Sugar transport proteins signature 1. 322 339 IPR005829 GO:0016020|GO:0022857|GO:0055085
Pumo5g02713 470 ProSiteProfiles Major facilitator superfamily (MFS) profile. 34 457 IPR020846 GO:0022857
Pumo5g02713 470 ProSitePatterns Sugar transport proteins signature 1. 92 109 IPR005829 GO:0016020|GO:0022857|GO:0055085
Pumo5g02713 470 NCBIfam sugar porter family MFS transporter 34 463 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pumo5g02713 470 SUPERFAMILY MFS general substrate transporter 29 464 IPR036259 -
Pumo5g02713 470 Gene3D MFS general substrate transporter like domains 30 470 IPR036259 -
Pumo5g02713 470 PRINTS Sugar transporter signature 281 291 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pumo5g02713 470 PRINTS Sugar transporter signature 129 148 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pumo5g02713 470 PRINTS Sugar transporter signature 393 405 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pumo5g02713 470 PRINTS Sugar transporter signature 370 391 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pumo5g02713 470 PANTHER - 29 465 - -
Pumo5g02713 470 CDD MFS_GLUT6_8_Class3_like 36 463 IPR044775 GO:0008643|GO:0051119
Pumo5g02713 470 FunFam sugar transporter ERD6-like 6 29 468 - -
Pumo5g02713 470 Pfam Sugar (and other) transporter 46 466 IPR005828 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02713 Pumo-Chr5 73733015 73737784 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02713 1 469 Organic Solute Cotransporters AT5G18840 58.873 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02713 K03444 - gmx:100785248 855.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02713 5 73733015 73737784 Pumo5g03705 5 86695577 86699757 ECH
Pumo5g02713 5 73733015 73737784 Pumo5g02713 5 73733015 73737784 ECH
Pumo5g02713 5 73733015 73737784 Pumo5g03700 5 86590095 86594360 ECH