Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04046 ATGAATGAAACTTGGAACATAATGTCACATTATCATTTGGCGCCAAAGGATGACCATGTTTGGGCTGATTTGCTACCAAGGAAGTTGTTGAAAGAGGAAAACCAACATGATTGGGATATGATGAGGTTGAGGAAAATTGAGAAAGTGGGTGTGTTGAAGCCACCCCAGCAACCTCAAGATTTTCTCAAACCAGTGTCTCTGCATGACGTGAGATTGCATGATGGTTCAATCCATGCTCAGGCACAACAGACAAACTTAGAGTATCTTTTGATGTTGGATGAGGACAGGTTACTCTGGAGCTTTAGGAAGACAGCTGGCCTTCCAACCCCTGGAACACCATATGGAGGGTGGGAAGATCCAAAAATGGAGCTCAGGGGTCATTTTGTTGGTCACTACTTGAGTGCATCAGCTTTAATGTGGGCCAGCACACATAATGATAGCCTGAAGAAGAAAACGTCAGCTCTTGTTGCCAATCTCTCTATCTGTCAGGAAAAAATTGGCACAGGATATCTCTCTGCCTTTCCATCTGAATTTTTTGATCGATTTCAAGCTACTAAGTATGTTTGGGCTCCCTATTACACCATTCACAAGATCTTGGCTGGCCTTTTGGATCAACATTCTATAGCTGAAAATCCTCAAGCCCTAAAAATGGTGACATGGATGGTAGATTACTTTTACAACCGAGTGCAGAATGTTATAACAAAGTTTAGTATAAGTAGACACTATCAATCGCTGAATGAAGAAACTGGAGGCATGAATGATGTCCTTTACAAACTATACAGCATAACGGGAGATTCAAGGCATCTATTGTTAGCTCACCTTTTTGACAAACCATGCTTTCTAGGGTTGCTCGCAGTGAAGGCTAATGATATAGCTCATTTTCATGCTAATACACATATCCCAGTGGTTGTTGGATCTCAAATGCGGTATGAAGTCACTGGTGATCCACTTTATAAGGAAATAGGAACATTCTTTATGGATCTTGTTAACTCTTCTCATACTTGTGCAACTGTAGGGACATCAGTCAACGAATTTTGGAGTGATCCAAAGAGAATGGTAGACACCCTAGAATCCACTGACAATGAGGAATCATGCACAACTTACAATATGTTGAAGGTTTCACGCCACTTGTTTACATGGACCAAAAAGGTATCATATGCAGATTATTATGAGCGTGCCTTAACAAATGGTATATTAAGCATTCAAAGAGGAACAGAACCTGGAGTGATGATATATATGCTGCCACAAGGTCGTGGAGTTTCCAAGGCTAAAACTTACTTTGGTTGGGGAACGAAGTTTGATAGTTTCTGGTGCTGCTATGGAACAGGAAATTTTTTGTCTATCACGCGAAAATGGAATGCTGGTGACAAGCTAAGCCTTCAATTGCCCATTACCCTCCGAACAGAGGCCATAAAAGATGACAGGTCTAAATATGCCTCTATTCAAGCAATTCTTTATGGTCCGTATCTTCTTGCTGGTCACACCACTGACTGGATTACTCCAATTCCAGCCAGCTACAACAGTCAGTTATTCTATTTTTCCCAAGCCTTTGCAAACTCTACTTTTGTTTTGACAAATGCAAACCAATCATTAGCAGTGAAAAAATTACCGGAGCCAGGAACTGATTTGGCTCTTCATGCAACTTTTAGAGTTATCCAAGGGAAATCTTCCACAAAGTTTACCACATTGACAGATGCTATTGGTAAATCAGTGATGTTAGAACCGTTTGATCATCCAGGAATGCGAGTGATTCACCAAGGAATGGAACATCCTCTTACAGTTGTAGGCTCTTCCTCTGGTGGACCATCTTCTGTTTTTGTTGTGGTACCAGGATTGGATGGACAAAAGGAAACCATATCTTTAGAATCCAAAAGCCATAACGGTTGCTTCGTGCATAGTGGTTCGCGTTCTGGTAGAGGAGTGAAGCTCAGTTGCAAGACTGCTTCTGATGCTACATTTAACCAAGCAGCGAGTTTTATTGCCAAGAGAGGAATGAGCAAATATAATCCTATCAGCTTTGTGGCCAAAGGGGCCAACGGGAATTTTCTTCTGGAGCCGTTATTGGCCTTCAGAGATGAGCCTTATACAGTTTATTTCAACATTAAAGGTTGA 2112 0.4138 MNETWNIMSHYHLAPKDDHVWADLLPRKLLKEENQHDWDMMRLRKIEKVGVLKPPQQPQDFLKPVSLHDVRLHDGSIHAQAQQTNLEYLLMLDEDRLLWSFRKTAGLPTPGTPYGGWEDPKMELRGHFVGHYLSASALMWASTHNDSLKKKTSALVANLSICQEKIGTGYLSAFPSEFFDRFQATKYVWAPYYTIHKILAGLLDQHSIAENPQALKMVTWMVDYFYNRVQNVITKFSISRHYQSLNEETGGMNDVLYKLYSITGDSRHLLLAHLFDKPCFLGLLAVKANDIAHFHANTHIPVVVGSQMRYEVTGDPLYKEIGTFFMDLVNSSHTCATVGTSVNEFWSDPKRMVDTLESTDNEESCTTYNMLKVSRHLFTWTKKVSYADYYERALTNGILSIQRGTEPGVMIYMLPQGRGVSKAKTYFGWGTKFDSFWCCYGTGNFLSITRKWNAGDKLSLQLPITLRTEAIKDDRSKYASIQAILYGPYLLAGHTTDWITPIPASYNSQLFYFSQAFANSTFVLTNANQSLAVKKLPEPGTDLALHATFRVIQGKSSTKFTTLTDAIGKSVMLEPFDHPGMRVIHQGMEHPLTVVGSSSGGPSSVFVVVPGLDGQKETISLESKSHNGCFVHSGSRSGRGVKLSCKTASDATFNQAASFIAKRGMSKYNPISFVAKGANGNFLLEPLLAFRDEPYTVYFNIKG 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04046 703 PANTHER PROLINE-TRNA LIGASE (DUF1680) 10 443 - -
Pumo4g04046 703 Pfam Beta-L-arabinofuranosidase, GH127 69 443 IPR012878 -
Pumo4g04046 703 SUPERFAMILY Six-hairpin glycosidases 125 439 IPR008928 GO:0005975
Pumo4g04046 703 Gene3D - 561 686 - -
Pumo4g04046 703 SUPERFAMILY AbfB domain 571 684 IPR036195 GO:0046373|GO:0046556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04046 Pumo-Chr4 81159636 81164223 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04046 K09955 - gmx:100781521 741.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04046 4 81159636 81164223 Pumo4g04046 4 81159636 81164223 ECH
Pumo4g04046 4 81159636 81164223 Pumo11g01663 11 48029177 48030066 PCT
Pumo11g01665 11 48037389 48044397 Pumo4g04046 4 81159636 81164223 PCT